Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11] 288 sequences; 47,717,833 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq116 726 0.0 >seq116 Length=9578 Score = 726 bits (804), Expect = 0.0 Identities = 561/658 (85%), Gaps = 8/658 (1%) Strand=Plus/Plus Query 28 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 87 ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| Sbjct 4507 AGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTAAATTTCTT 4566 Query 88 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 147 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4567 CTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 4626 Query 148 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 207 ||||||||| |||||| |||||| |||||||||||||||||||||||||||| |||| || Sbjct 4627 AGCACTTTGAAAAGAGGGTTAAATAGCACGTGAAATTGTTGAAAGGGAAGCGTTTGCGAC 4686 Query 208 CAGACTTGCCCGCAGTT-GCTCAACCGGCCCCTCGG-CCGGTGCACTCTTCTGCGGTCAG 265 ||||| | | |||| | ||| |||| ||| |||||||||| || | | || Sbjct 4687 CAGACCTTTTC-CAGTGAGATCATCCGGTAT-TCGTACCGGTGCACTTGTCCTGGATTAG 4744 Query 266 GCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGT 325 ||||||||| | | | |||||||||| ||||| || || | | | ||| || Sbjct 4745 GCCAGCATCGGTTTTCTTAGGGGGATAAAGGCTTGGGGAACGTAGCTCTC--CAGGGAGT 4802 Query 326 GTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATG 385 |||||||||| | | ||| | | || |||| |||| |||||||| | | |||||| Sbjct 4803 GTTATAGCCCCTTGCGTAATACCCCTCGGG-GGACCGAGGACCGCGCTCTG-CAAGGATG 4860 Query 386 CTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTAT 445 ||||||||||||| || | || ||||||||| |||||||||||||||||| ||||| | | Sbjct 4861 CTGGCGTAATGGTCGTCAACGACCCGTCTTGAAACACGGACCAAGGAGTCGAACATTTGT 4920 Query 446 GCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGT 505 |||||||||||||||| |||||| ||||||||||||||||||||||||| || ||| Sbjct 4921 GCGAGTGTTTGGGTGTTAAACCCTCACGCGTAATGAAAGTGAACGGAGGTGAGAGCCCTC 4980 Query 506 GAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTG 565 ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 4981 ACGGGTGCATCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAACTG 5040 Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625 || ||||||||||||||||||||||||| || |||||||||||||||||||||||||||| Sbjct 5041 TTCGGACCCGAAAGATGGTGAACTATGCGTGGATAGGGTGAAGCCAGAGGAAACTCTGGT 5100 Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||||||||||||||| ||||||||||||||||||||| || | || ||||||| Sbjct 5101 GGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATCTGCGCATGGGGGCGA 5158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079993822400