Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11]
288 sequences; 47,717,833 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq116 726 0.0
>seq116
Length=9578
Score = 726 bits (804), Expect = 0.0
Identities = 561/658 (85%), Gaps = 8/658 (1%)
Strand=Plus/Plus
Query 28 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 87
||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||
Sbjct 4507 AGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTAAATTTCTT 4566
Query 88 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 147
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4567 CTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 4626
Query 148 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 207
||||||||| |||||| |||||| |||||||||||||||||||||||||||| |||| ||
Sbjct 4627 AGCACTTTGAAAAGAGGGTTAAATAGCACGTGAAATTGTTGAAAGGGAAGCGTTTGCGAC 4686
Query 208 CAGACTTGCCCGCAGTT-GCTCAACCGGCCCCTCGG-CCGGTGCACTCTTCTGCGGTCAG 265
||||| | | |||| | ||| |||| ||| |||||||||| || | | ||
Sbjct 4687 CAGACCTTTTC-CAGTGAGATCATCCGGTAT-TCGTACCGGTGCACTTGTCCTGGATTAG 4744
Query 266 GCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGT 325
||||||||| | | | |||||||||| ||||| || || | | | ||| ||
Sbjct 4745 GCCAGCATCGGTTTTCTTAGGGGGATAAAGGCTTGGGGAACGTAGCTCTC--CAGGGAGT 4802
Query 326 GTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATG 385
|||||||||| | | ||| | | || |||| |||| |||||||| | | ||||||
Sbjct 4803 GTTATAGCCCCTTGCGTAATACCCCTCGGG-GGACCGAGGACCGCGCTCTG-CAAGGATG 4860
Query 386 CTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTAT 445
||||||||||||| || | || ||||||||| |||||||||||||||||| ||||| | |
Sbjct 4861 CTGGCGTAATGGTCGTCAACGACCCGTCTTGAAACACGGACCAAGGAGTCGAACATTTGT 4920
Query 446 GCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGT 505
|||||||||||||||| |||||| ||||||||||||||||||||||||| || |||
Sbjct 4921 GCGAGTGTTTGGGTGTTAAACCCTCACGCGTAATGAAAGTGAACGGAGGTGAGAGCCCTC 4980
Query 506 GAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTG 565
||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 4981 ACGGGTGCATCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAACTG 5040
Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625
|| ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct 5041 TTCGGACCCGAAAGATGGTGAACTATGCGTGGATAGGGTGAAGCCAGAGGAAACTCTGGT 5100
Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|||||||||||||||||||| ||||||||||||||||||||| || | || |||||||
Sbjct 5101 GGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATCTGCGCATGGGGGCGA 5158
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079993822400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |