Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11]
288 sequences; 47,717,833 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq116 279 1e-72
>seq116
Length=9578
Score = 279 bits (308), Expect = 1e-72
Identities = 185/203 (91%), Gaps = 2/203 (1%)
Strand=Plus/Plus
Query 126 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTT 185
|||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||
Sbjct 3324 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGTTACACTGACAGAGCCAGCGAGTA 3383
Query 186 CATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAG 245
| || |||||| | || | ||||||||||||||||||||||||||||||||||||||
Sbjct 3384 C-TC-CCTTGGTAGAAATACCCGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAG 3441
Query 246 CATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGT 305
|||||||||||||||||||||||||||||| |||||||||||| ||||||| | ||||
Sbjct 3442 CATTGCAATTATTGCTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAACTTGCGT 3501
Query 306 TGATTACGTCCCTGCCCTTTGTA 328
|||||||||||||||||||||||
Sbjct 3502 TGATTACGTCCCTGCCCTTTGTA 3524
Score = 138 bits (152), Expect = 2e-30
Identities = 94/106 (89%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||||||||||| | |||||||| | ||| ||||||||||
Sbjct 2861 GAACGAGACCTTAACCTGCTAAATAGCCCGTATTGCTTTGGCAGTACGCTGGCTTCTTAG 2920
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGT 125
|||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 2921 AGGGACTATCCGCTCAAGCGGATGGAAGTTTGAGGCAATAACAGGT 2966
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947197272064
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |