Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11] 288 sequences; 47,717,833 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq1 104 9e-17 >seq1 Length=3254829 Score = 104 bits (114), Expect = 9e-17 Identities = 119/154 (77%), Gaps = 6/154 (4%) Strand=Plus/Minus Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484 ||||||||||||| || ||||||| | | ||||||||||| | || || || ||||| | Sbjct 3004121 CAATAGTCATACGGGAAGGAATGGCGTGTGGGTTGATGATTAAATCGGGAACGATGCCCT 3004062 Query 364485 CAGCG-GTAAAGGGCATATCTTC-GGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGC 364542 | ||| || || ||||| ||||| || || | | ||| |||||||||||| || || | Sbjct 3004061 C-GCGAGTGAAAGGCATGTCTTCTTGGCGGTAAG-TGACACCAATGGTTCCTTTCTGACC 3004004 Query 364543 ATAGCGAGAAGCAAACTTGTCGCCAATGACTGGG 364576 | ||||||||||||||||| || || ||||| Sbjct 3004003 GTGACGAGAAGCAAACTTGTCTCCGAT--CTGGG 3003972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884879444769184