Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12-
21] 3,253 sequences; 60,403,714 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq2043 307 2e-81
seq2667 170 3e-40
>seq2043
Length=888
Score = 307 bits (340), Expect = 2e-81
Identities = 208/229 (91%), Gaps = 3/229 (1%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||| |
Sbjct 530 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCACGCTTACTAGGAATT-C 473
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| || ||||| ||||||
Sbjct 472 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAAAGTTTCACAAGATT 413
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||| | ||| |||| |||||||||| |||||||| | | |||||||||||||||||||
Sbjct 412 ACCCAGTCCTTTCGGACAAGGTGATAAACTCGTTGGCTCCGTCAGTGTAGCGCGCGTGCG 353
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 352 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 304
>seq2667
Length=632
Score = 170 bits (188), Expect = 3e-40
Identities = 187/244 (77%), Gaps = 6/244 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||| |||| | | |||||| ||||||||| ||| ||| |
Sbjct 442 GTACAAAGGGCAGGGACGTATTCAGCGCGGGAT-GATGACCCGCGCTTACAAGGTATT-C 385
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
|||||||| ||| | |||||||| || ||||||||||||| |||| | ||||
Sbjct 384 CTCGTTGACGACGGAAAATTGCAACCGTCGATCCCCATCACGAACGGATTTGGA-GATT- 327
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
|||| || | | | ||||||||| |||||||||| |||||||||
Sbjct 326 --CGGAAATGCTCTCGCATATCCGTCACTCGTTGACCCGTTCAGTGTAGCACGCGTGCGG 269
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240
||||| ||||||||||||||| ||||||||||||||||| | ||||||||| ||| | |
Sbjct 268 CCCAGGACATCTAAGGGCATCTCAGACCTGTTATTGCCTGGAGCTTCCGTGGGCTAGACG 209
Query 241 GCCA 244
|||
Sbjct 208 CCCA 205
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751976301895
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |