Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12- 21] 3,253 sequences; 60,403,714 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq2043 307 2e-81 seq2667 170 3e-40 >seq2043 Length=888 Score = 307 bits (340), Expect = 2e-81 Identities = 208/229 (91%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||| | Sbjct 530 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCACGCTTACTAGGAATT-C 473 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| || ||||| |||||| Sbjct 472 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAAAGTTTCACAAGATT 413 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| | ||| |||| |||||||||| |||||||| | | ||||||||||||||||||| Sbjct 412 ACCCAGTCCTTTCGGACAAGGTGATAAACTCGTTGGCTCCGTCAGTGTAGCGCGCGTGCG 353 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 352 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 304 >seq2667 Length=632 Score = 170 bits (188), Expect = 3e-40 Identities = 187/244 (77%), Gaps = 6/244 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||| |||| | | |||||| ||||||||| ||| ||| | Sbjct 442 GTACAAAGGGCAGGGACGTATTCAGCGCGGGAT-GATGACCCGCGCTTACAAGGTATT-C 385 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||||| ||| | |||||||| || ||||||||||||| |||| | |||| Sbjct 384 CTCGTTGACGACGGAAAATTGCAACCGTCGATCCCCATCACGAACGGATTTGGA-GATT- 327 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 |||| || | | | ||||||||| |||||||||| ||||||||| Sbjct 326 --CGGAAATGCTCTCGCATATCCGTCACTCGTTGACCCGTTCAGTGTAGCACGCGTGCGG 269 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240 ||||| ||||||||||||||| ||||||||||||||||| | ||||||||| ||| | | Sbjct 268 CCCAGGACATCTAAGGGCATCTCAGACCTGTTATTGCCTGGAGCTTCCGTGGGCTAGACG 209 Query 241 GCCA 244 ||| Sbjct 208 CCCA 205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751976301895