Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12-
21] 3,253 sequences; 60,403,714 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq1696 226 5e-57
>seq1696
Length=1147
Score = 226 bits (250), Expect = 5e-57
Identities = 200/246 (81%), Gaps = 4/246 (2%)
Strand=Plus/Minus
Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGG 132
|||||| |||||||||||||||||||||||||||| |||| | ||||||||||||||||
Sbjct 445 TTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGGCGATTGCCCTGAATACATTAGCATGG 386
Query 133 AATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTA 192
|||||||||||||||| |||| ||||||||||||||| | || ||||||||||
Sbjct 385 AATAATAGAATAGGACC--CGGTCCTATTTTGTTGGTTTGTTTGAATCGGGTAATGATTA 328
Query 193 ATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG 252
| ||||| || ||||| | |||||| | |||||||||||||||||||| |
Sbjct 327 AAAGGGACGGTTGGGGGCATTCGTATTCCGACGCTAGAGGTGAAATTCTTGGATTGTCGG 268
Query 253 AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312
||||| ||| |||||||||||| ||||||| ||||||||| |||| ||||||||||
Sbjct 267 AAGACGAACAGCTGCGAAAGCGTCTGCCAAGGACGTTTTCATTGATCA-AGAACGAAAGT 209
Query 313 TAGGGG 318
|||||
Sbjct 208 AAGGGG 203
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915170228544
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |