Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12- 21] 3,253 sequences; 60,403,714 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1696 226 5e-57 >seq1696 Length=1147 Score = 226 bits (250), Expect = 5e-57 Identities = 200/246 (81%), Gaps = 4/246 (2%) Strand=Plus/Minus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGG 132 |||||| |||||||||||||||||||||||||||| |||| | |||||||||||||||| Sbjct 445 TTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGGCGATTGCCCTGAATACATTAGCATGG 386 Query 133 AATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTA 192 |||||||||||||||| |||| ||||||||||||||| | || |||||||||| Sbjct 385 AATAATAGAATAGGACC--CGGTCCTATTTTGTTGGTTTGTTTGAATCGGGTAATGATTA 328 Query 193 ATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG 252 | ||||| || ||||| | |||||| | |||||||||||||||||||| | Sbjct 327 AAAGGGACGGTTGGGGGCATTCGTATTCCGACGCTAGAGGTGAAATTCTTGGATTGTCGG 268 Query 253 AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 ||||| ||| |||||||||||| ||||||| ||||||||| |||| |||||||||| Sbjct 267 AAGACGAACAGCTGCGAAAGCGTCTGCCAAGGACGTTTTCATTGATCA-AGAACGAAAGT 209 Query 313 TAGGGG 318 ||||| Sbjct 208 AAGGGG 203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915170228544