Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12-
21] 3,253 sequences; 60,403,714 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq1023 165 3e-38
seq2753 134 6e-29
seq226 102 3e-19
>seq1023
Length=3215
Score = 165 bits (182), Expect = 3e-38
Identities = 116/130 (89%), Gaps = 2/130 (2%)
Strand=Plus/Minus
Query 555 GAGCA-TAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613
||||| |||| | | ||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct 2496 GAGCAGTAGC-GCTAGGACCCGAAAGATGGTGAACTATGCCTGAGTAGGGCGAAGCCAGA 2438
Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673
|||| ||||||||||||||| |||||| ||| ||||||||||| ||||| || ||||||
Sbjct 2437 AGAAATTCTGGTGGAGGCTCGTAGCGGTGCTGACGTGCAAATCGCTCGTCGAACTTGGGT 2378
Query 674 ATAGGGGCGA 683
||||||||||
Sbjct 2377 ATAGGGGCGA 2368
Score = 134 bits (148), Expect = 6e-29
Identities = 128/161 (80%), Gaps = 2/161 (1%)
Strand=Plus/Minus
Query 39 CGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAA 98
||||||| || | |||||||||| ||||||| | || ||||||| || || || ||||||
Sbjct 2972 CGAGTCGGGTAGCTTGGGAATGCTGCTCTAA-TCGGTGGTAAATCTCATCGAAGGCTAAA 2914
Query 99 TATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158
|| ||| || |||||||||||||||||| |||| ||||| |||||||||||||| |
Sbjct 2913 TACTGGTAGGAAACCGATAGCGCACAAGTACCGTGAGGGAAAGGTGAAAAGCACTTTGAA 2854
Query 159 AAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
||||| | | | ||| || ||||| ||| |||||||||
Sbjct 2853 AAGAG-GGTGACAAGAACCTGAAACCGTTACGAGGGAAGCG 2814
>seq2753
Length=609
Score = 134 bits (148), Expect = 6e-29
Identities = 91/102 (89%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
||||||||||||||||||||||||||| ||||||| |||||||| | |||||||||||||
Sbjct 508 GAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAATTCCATCTAAAGCTAAAT 567
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAG 141
||||| |||||||||||||| ||||||| |||| |||||
Sbjct 568 ATTGGGGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAG 609
>seq226
Length=38918
Score = 102 bits (112), Expect = 3e-19
Identities = 73/84 (87%), Gaps = 0/84 (0%)
Strand=Plus/Minus
Query 599 TAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGA 658
||||| ||||||||||||| |||||| ||||||| ||||||||||| | ||||| ||||
Sbjct 7216 TAGGGCGAAGCCAGAGGAAGCTCTGGCAGAGGCTCACAGCGGTTCTGACATGCAAGTCGA 7157
Query 659 TCGTCAAATTTGGGTATAGGGGCG 682
||||||||| | ||||| ||||||
Sbjct 7156 TCGTCAAATATAGGTATGGGGGCG 7133
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079930223150
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |