Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12- 21] 3,253 sequences; 60,403,714 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq2043 410 2e-112 seq2667 262 6e-68 >seq2043 Length=888 Score = 410 bits (454), Expect = 2e-112 Identities = 245/257 (95%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 385 ACTCGTTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 326 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 ||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||| Sbjct 325 CCTGTTATTGCCTCAAACTTCCATTAGCTAGACGCCAATAGTCCCTCTAAGAAGCCAGCA 266 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 | ||||| ||||| |||||| |||||||||||||||||||||||||||||||||||| Sbjct 265 GCTAACCAAAGTCGGCCGGGCTAGTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 206 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 205 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 146 Query 242 AGAGCTATCAATCTGTC 258 ||||||||||||||||| Sbjct 145 AGAGCTATCAATCTGTC 129 >seq2667 Length=632 Score = 262 bits (290), Expect = 6e-68 Identities = 217/261 (83%), Gaps = 4/261 (2%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||| |||||||||||||| ||||||||||||||| |||| Sbjct 302 ACTCGTTGACCCGTTCAGTGTAGCACGCGTGCGGCCCAGGACATCTAAGGGCATCTCAGA 243 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCA--G 119 ||||||||||||| | ||||| | |||| || ||| | ||||| |||| |||| | | Sbjct 242 CCTGTTATTGCCTGGAGCTTCCGTGGGCTAGACGCCCACAGTCCGTCTAGGAAGGCTTTG 183 Query 120 CCAC-CAACCATAGTCGATGGGGC-TATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177 || | | |||| || | || || || ||||| | |||||||| |||||| ||||| Sbjct 182 CCTCGCTACCAAAGGTAACGGCGCCTAGCTAGCACGCCCAGGTCTCGCTCGTTAACGGAA 123 Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 237 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 122 TTAACCAGACAGATCACTCCACCAACTAAGAACGGCCATGCACCACCAACCATAGAATCA 63 Query 238 AGAAAGAGCTATCAATCTGTC 258 |||||||||| |||||||||| Sbjct 62 AGAAAGAGCTCTCAATCTGTC 42 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796774890093