Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12-
21] 3,253 sequences; 60,403,714 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq1023 320 3e-85
>seq1023
Length=3215
Score = 320 bits (354), Expect = 3e-85
Identities = 221/250 (88%), Gaps = 0/250 (0%)
Strand=Plus/Plus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 292 TCATCGGTAGGATAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTG 351
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150
|| | ||||||||||||| || ||| || |||||| || |||||||||||||||||
Sbjct 352 TTGGCGGGTGAACAATCCGACACTTTGCGCCTTCTGCGACGCAATGATAGGAAGAGCCGA 411
Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210
||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct 412 CATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCC 471
Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270
||||||||||||||||| ||||||| || |||||| |||| ||||||||||||||
Sbjct 472 CTGTGGTAACTTTTCTGACACCTCTCGCTTCAAATCTCGAATCGTGAAAGGATCGATAGG 531
Query 271 CCACACTTTC 280
|||| |||||
Sbjct 532 CCACGCTTTC 541
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854372206368
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |