Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12- 21] 3,253 sequences; 60,403,714 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq2043 434 2e-119 seq2667 178 2e-42 >seq2043 Length=888 Score = 434 bits (480), Expect = 2e-119 Identities = 283/310 (91%), Gaps = 1/310 (0%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||| ||||| |||| |||||| | || |||||||||| Sbjct 220 GAACGAGACCTTAACCTGCTAACTAGCCCGGCCGACTTTGGTTAGCTGCTGGCTTCTTAG 279 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 ||||||||| ||| || ||| |||||||||||||||||||||||||||||||||||||| Sbjct 280 AGGGACTATTGGCGTCTAGCTAATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 339 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| || Sbjct 340 AGATGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAACGAGTTTATCACCTTGTCC 399 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 | |||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 400 GAAAGGACTGGGTAATCTTGTGAAACTTTGTCGTGCTGGGGATAGAGCATTGCAATTATT 459 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 ||||||||||||||||| ||||||||||| | ||||||||| |||||||||||||||||| Sbjct 460 GCTCTTCAACGAGGAATTCCTAGTAAGCGTGAGTCATCAGCTCGCGTTGATTACGTCCCT 519 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 520 GCCCTTTGTA 529 >seq2667 Length=632 Score = 178 bits (196), Expect = 2e-42 Identities = 196/258 (76%), Gaps = 6/258 (2%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||| |||| ||||| | ||| || |||| | ||||| | ||||||||||||||||| | Sbjct 189 CTTCCTAGACGGACTGTGGGCGTCTAGCCCACGGAAGCTCCAGGCAATAACAGGTCTGAG 248 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| |||||||||||||| |||||||||| | | |||||||| | Sbjct 249 ATGCCCTTAGATGTCCTGGGCCGCACGCGTGCTACACTGAACGGGTCAACGAGTGACGGA 308 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 | | | | || | ||||| ||| | ||||| ||||||| || ||| Sbjct 309 TATGCGAGAGCATTTCCG---AATCT--CCAAATCCGTTCGTGATGGGGATCGACGGTTG 363 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| | || |||||||||||| ||| ||||||||| ||||||| | |||| ||| | Sbjct 364 CAATTTTCCGTCGTCAACGAGGAATACCTTGTAAGCGCGGGTCATCATCCCGCGCTGAAT 423 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 424 ACGTCCCTGCCCTTTGTA 441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947169187584