Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12- 21] 3,253 sequences; 60,403,714 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq1023 462 7e-128 >seq1023 Length=3215 Score = 462 bits (512), Expect = 7e-128 Identities = 434/545 (80%), Gaps = 27/545 (5%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||| |||| ||||||||||||||| |||| |||||||||||| |||| | Sbjct 588 CTTTTGCGCTACGTGAGATTTCTGTTCTCACTGAGCTGATCTTAGGACACCTTCGTTGTC 647 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 | || |||||| |||||||||||||||||||| ||| | |||| | | | || Sbjct 648 TTGTAGAAGATGTACCGCCCCAGCCAAACTCCCCTCCTAAATCTGTCCTAGGCGGTGGTC 707 Query 127 ------GGCC---CGCGAAGGAC-------CTTAACGCCAGAAAATGG-TCGGTGAA--G 167 || | | ||||| | ||| | ||| |||| | || | || | Sbjct 708 ACCTATGGTCTTTCCCGAAGAAAAAACCGGCTTGGCTCCAAAAAAAGAATCAGAAAACTG 767 Query 168 ACCAGTTCCGCTTCATTG---ATTAAGTaaaaaaaCGATAAGG-GTAGTGGTATTTCACT 223 ||| ||| | | || | |||||||| || ||| || |||||||||||||||| Sbjct 768 ACCCCATCCACACC--TGCCTAGTAAGTAAAGCAA-GATTGGGAGTAGTGGTATTTCACT 824 Query 224 TGCGCCGAAACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTA 283 ||| || || | ||||||| ||| ||||||||| ||| | | |||||| | || || Sbjct 825 GGCGACGTAAAGTCTCCCACCTATGCTACACCTCCCAACTTGCTCCACAAAATTAGAATA 884 Query 284 GAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCT 343 |||||||||||||||||||||||||||||||| |||| ||| |||||||||| ||||| Sbjct 885 GAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCCGATTTTTCCAGGCCCGTTCCCCTGGCT 944 Query 344 GTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGT 403 |||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||| Sbjct 945 GTGGTTTCGCTAGA-AGCAGATAGGGACAGTAGGAATCTCGTTAATCCATTCATGCGCGT 1003 Query 404 CACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTT 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1004 CACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCTGTT 1063 Query 464 TACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACAT 523 |||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||| Sbjct 1064 TACCCGCGCTTGATTGAATCTCTTCACTTTGACATTCAGAGCACTGAGCAGAAATCACAT 1123 Query 524 TGCGT 528 ||||| Sbjct 1124 TGCGT 1128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635146806944