Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12- 21] 3,253 sequences; 60,403,714 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq1696 306 1e-80 >seq1696 Length=1147 Score = 306 bits (338), Expect = 1e-80 Identities = 377/507 (74%), Gaps = 30/507 (6%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 || ||||||||||||| || ||||| | ||||| ||| ||||| |||||||||||| Sbjct 668 GTTCTCATTCCAATTAGAAAACCCATCGG-GCCCTCTATTGATATTTCTTGTCACTACCT 726 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 727 CCCGGTGTCCGGATTGGGTAAGTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 786 Query 121 TCTCAGGCTCCCTCTCCGGAAT--CGAACCCTAATTCCCCGTTACCCGTTGATACCATGG 178 |||||||||||||||||||||| || |||| | ||||||||||| ||||||| Sbjct 787 TCTCAGGCTCCCTCTCCGGAATCCCGCACCC--ACGGTCCGTTACCCGTCACAACCATGG 844 Query 179 TAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGG 238 || |||| || | ||||||| |||||||||||| |||||||||||| | | |||| Sbjct 845 TAAGCCAATACCTTACCATCCAAAGTTGATAGGTCAGAAATTTGAACGGTGCGTCGC--- 901 Query 239 CTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTG 298 | || |||||| | || || |||||||||| | | ||| Sbjct 902 AACTAG----TGCGATCAGAAAAAAAATCTAGAATCACCAAAAA------ATTGGC---- 947 Query 299 GTTTTTTATCTAATAAATA-CACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTC 357 || | | |||||| || ||| ||| || | ||| ||| |||||||||| Sbjct 948 -TTGTATCTCTAATTTGTACCACGACTTGCGTCGCTTGGG----AGGCACGTATTAGCTC 1002 Query 358 TAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAA 417 ||||||||| |||||||||| ||||| | || | | || ||| ||| ||| |||| Sbjct 1003 TAGAATTACTACGGTTATCCGAGTAGT-ATTTAGCACCGAAGAAATTATAGCTGTTTTAC 1061 Query 418 TGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCT 477 ||||||||||||||||| |||||| || |||||| || ||||||||||| || Sbjct 1062 CGAGCCATTCGCAGTTTCGTTGTATAATACACTCATACTTGCACTTGCATGGCTTAGTCC 1121 Query 478 TTGAGACAAGCATATGACTACTGGCAG 504 | |||||||||||| || |||||||| Sbjct 1122 TATAGACAAGCATAT-ACCACTGGCAG 1147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510350866688