Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12-
21] 3,253 sequences; 60,403,714 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq1696 306 1e-80
>seq1696
Length=1147
Score = 306 bits (338), Expect = 1e-80
Identities = 377/507 (74%), Gaps = 30/507 (6%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|| ||||||||||||| || ||||| | ||||| ||| ||||| ||||||||||||
Sbjct 668 GTTCTCATTCCAATTAGAAAACCCATCGG-GCCCTCTATTGATATTTCTTGTCACTACCT 726
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 727 CCCGGTGTCCGGATTGGGTAAGTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 786
Query 121 TCTCAGGCTCCCTCTCCGGAAT--CGAACCCTAATTCCCCGTTACCCGTTGATACCATGG 178
|||||||||||||||||||||| || |||| | ||||||||||| |||||||
Sbjct 787 TCTCAGGCTCCCTCTCCGGAATCCCGCACCC--ACGGTCCGTTACCCGTCACAACCATGG 844
Query 179 TAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGG 238
|| |||| || | ||||||| |||||||||||| |||||||||||| | | ||||
Sbjct 845 TAAGCCAATACCTTACCATCCAAAGTTGATAGGTCAGAAATTTGAACGGTGCGTCGC--- 901
Query 239 CTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTG 298
| || |||||| | || || |||||||||| | | |||
Sbjct 902 AACTAG----TGCGATCAGAAAAAAAATCTAGAATCACCAAAAA------ATTGGC---- 947
Query 299 GTTTTTTATCTAATAAATA-CACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTC 357
|| | | |||||| || ||| ||| || | ||| ||| ||||||||||
Sbjct 948 -TTGTATCTCTAATTTGTACCACGACTTGCGTCGCTTGGG----AGGCACGTATTAGCTC 1002
Query 358 TAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAA 417
||||||||| |||||||||| ||||| | || | | || ||| ||| ||| ||||
Sbjct 1003 TAGAATTACTACGGTTATCCGAGTAGT-ATTTAGCACCGAAGAAATTATAGCTGTTTTAC 1061
Query 418 TGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCT 477
||||||||||||||||| |||||| || |||||| || ||||||||||| ||
Sbjct 1062 CGAGCCATTCGCAGTTTCGTTGTATAATACACTCATACTTGCACTTGCATGGCTTAGTCC 1121
Query 478 TTGAGACAAGCATATGACTACTGGCAG 504
| |||||||||||| || ||||||||
Sbjct 1122 TATAGACAAGCATAT-ACCACTGGCAG 1147
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510350866688
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |