Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20capensis_20[genbank_20GCA_5F001510575.1_202016-01-11]
29 sequences; 35,537,816 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq14 138 3e-30
>seq14
Length=23461
Score = 138 bits (152), Expect = 3e-30
Identities = 203/285 (71%), Gaps = 18/285 (6%)
Strand=Plus/Minus
Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66
|| |||| |||| ||||| ||| ||| ||||||||| | | ||||||||
Sbjct 21187 TAAACTGTATCTGCACAGTTATTCCAAGTTCACTGAGCCAATCATAGAGACAGCTGTTGT 21128
Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126
|||||||| ||||| |||| | | | | ||| | | ||||| |||||||||||||||||
Sbjct 21127 ATCGTTACATCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGA 21068
Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAA----GAGCTTC-------G 175
|| | | |||| |||||||||||||||||| ||| |||| | ||||
Sbjct 21067 CCCTCA-CGTTAAGGCCGCCGTTTACCGGGGGTTCCGTCAATACCAAACTTCCTAAAAAA 21009
Query 176 CGTTAGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTC 235
|||| || ||| |||||| |||||||||||||| | |||||| | |||| |
Sbjct 21008 GTTTAGTTA----TATCTGTTAACCAGCCGGCACCGGGCAGACATCACACTCAATACTTA 20953
Query 236 CACTTTCGTGTT--TGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278
| ||| | || |||| ||||||||||||| | ||||||||||
Sbjct 20952 GATTTTAATCTTTATGCAAAGTGCTGTGTTTTAATTAAACAGTCG 20908
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260799634368
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |