Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knoxdaviesia_20capensis_20[genbank_20GCA_5F001510575.1_202016-01-11] 29 sequences; 35,537,816 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq23 333 5e-89 >seq23 Length=4176071 Score = 333 bits (368), Expect = 5e-89 Identities = 198/206 (96%), Gaps = 1/206 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| |||||||||||| | ||| | |||||||||||||||||||||||||||||| Sbjct 662760 TACTAAGCTGAATTACCATTGCGACGA-GTTCATCAGTAGGGTAAAACTAACCTGTCTCA 662702 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 662701 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 662642 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 662641 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAT 662582 Query 181 GAACGCTTGGCTGCCACAAGCCAGTT 206 ||||||||||| |||||||||||||| Sbjct 662581 GAACGCTTGGCCGCCACAAGCCAGTT 662556 Score = 333 bits (368), Expect = 5e-89 Identities = 198/206 (96%), Gaps = 1/206 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| |||||||||||| | ||| | |||||||||||||||||||||||||||||| Sbjct 672063 TACTAAGCTGAATTACCATTGCGACGA-GTTCATCAGTAGGGTAAAACTAACCTGTCTCA 672005 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 672004 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 671945 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 671944 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAT 671885 Query 181 GAACGCTTGGCTGCCACAAGCCAGTT 206 ||||||||||| |||||||||||||| Sbjct 671884 GAACGCTTGGCCGCCACAAGCCAGTT 671859 Score = 138 bits (152), Expect = 2e-30 Identities = 89/96 (93%), Gaps = 1/96 (1%) Strand=Plus/Minus Query 201 CCAGTT-ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAA 259 |||||| ||||||||||||||||||||||||||| || ||||| || ||||||| |||| Sbjct 662056 CCAGTTTATCCCTGTGGTAACTTTTCTGGCACCTATAACCTCAGATCTCGAGGGTTTAAA 661997 Query 260 GGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||||||||||||||||||||||||||||||||| Sbjct 661996 GGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 661961 Score = 138 bits (152), Expect = 2e-30 Identities = 89/96 (93%), Gaps = 1/96 (1%) Strand=Plus/Minus Query 201 CCAGTT-ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAA 259 |||||| ||||||||||||||||||||||||||| || ||||| || ||||||| |||| Sbjct 671359 CCAGTTTATCCCTGTGGTAACTTTTCTGGCACCTATAACCTCAGATCTCGAGGGTTTAAA 671300 Query 260 GGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||||||||||||||||||||||||||||||||| Sbjct 671299 GGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 671264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854399752224