Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20capensis_20[genbank_20GCA_5F001510575.1_202016-01-11]
29 sequences; 35,537,816 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq23 333 5e-89
>seq23
Length=4176071
Score = 333 bits (368), Expect = 5e-89
Identities = 198/206 (96%), Gaps = 1/206 (0%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||| |||||||||||| | ||| | ||||||||||||||||||||||||||||||
Sbjct 662760 TACTAAGCTGAATTACCATTGCGACGA-GTTCATCAGTAGGGTAAAACTAACCTGTCTCA 662702
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 662701 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 662642
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 662641 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAT 662582
Query 181 GAACGCTTGGCTGCCACAAGCCAGTT 206
||||||||||| ||||||||||||||
Sbjct 662581 GAACGCTTGGCCGCCACAAGCCAGTT 662556
Score = 333 bits (368), Expect = 5e-89
Identities = 198/206 (96%), Gaps = 1/206 (0%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||| |||||||||||| | ||| | ||||||||||||||||||||||||||||||
Sbjct 672063 TACTAAGCTGAATTACCATTGCGACGA-GTTCATCAGTAGGGTAAAACTAACCTGTCTCA 672005
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 672004 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 671945
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 671944 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAT 671885
Query 181 GAACGCTTGGCTGCCACAAGCCAGTT 206
||||||||||| ||||||||||||||
Sbjct 671884 GAACGCTTGGCCGCCACAAGCCAGTT 671859
Score = 138 bits (152), Expect = 2e-30
Identities = 89/96 (93%), Gaps = 1/96 (1%)
Strand=Plus/Minus
Query 201 CCAGTT-ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAA 259
|||||| ||||||||||||||||||||||||||| || ||||| || ||||||| ||||
Sbjct 662056 CCAGTTTATCCCTGTGGTAACTTTTCTGGCACCTATAACCTCAGATCTCGAGGGTTTAAA 661997
Query 260 GGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
||||||||||||||||||||||||||||||||||||
Sbjct 661996 GGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 661961
Score = 138 bits (152), Expect = 2e-30
Identities = 89/96 (93%), Gaps = 1/96 (1%)
Strand=Plus/Minus
Query 201 CCAGTT-ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAA 259
|||||| ||||||||||||||||||||||||||| || ||||| || ||||||| ||||
Sbjct 671359 CCAGTTTATCCCTGTGGTAACTTTTCTGGCACCTATAACCTCAGATCTCGAGGGTTTAAA 671300
Query 260 GGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
||||||||||||||||||||||||||||||||||||
Sbjct 671299 GGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 671264
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854399752224
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |