Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20capensis_20[genbank_20GCA_5F001510575.1_202016-01-11]
29 sequences; 35,537,816 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq23 774 0.0
>seq23
Length=4176071
Score = 774 bits (858), Expect = 0.0
Identities = 497/539 (92%), Gaps = 11/539 (2%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 661929 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATG 661870
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct 661869 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCCTCAACCCGGGTC 661810
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGA--CCAGTTCCGCTTCATT 184
||||||||||||||||||||||||||| ||| | |||| |||| |||||| |
Sbjct 661809 GGCCCGCGAAGGACCTTAACGCCAGAAGTTGGAC----AAGAGTCCAGCCCCGCTTA--T 661756
Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACT 244
|| ||||||||||||| || || |||||||||||||||| |||||||| ||||||||
Sbjct 661755 GAGTAAGTAAAAAAACAATGAGAGTAGTGGTATTTCACTGGCGCCGAA---GCTCCCACC 661699
Query 245 TATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCT 304
||| |||||||||||| ||| |||||| | ||| |||||||||||||||||||||||||
Sbjct 661698 TATCCTACACCTCTCATGTCTTTTCACCATGTCAAACTAGAGTCAAGCTCAACAGGGTCT 661639
Query 305 TCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 364
||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct 661638 TCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATGGTAGA 661579
Query 365 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 424
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 661578 TAGGGACAGTGGGAATCTCGTTGATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 661519
Query 425 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTT 484
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661518 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTC 661459
Query 485 CTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct 661458 CATCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGCCAACACCACTTTCTG 661400
Score = 774 bits (858), Expect = 0.0
Identities = 497/539 (92%), Gaps = 11/539 (2%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 671232 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATG 671173
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct 671172 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCCTCAACCCGGGTC 671113
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGA--CCAGTTCCGCTTCATT 184
||||||||||||||||||||||||||| ||| | |||| |||| |||||| |
Sbjct 671112 GGCCCGCGAAGGACCTTAACGCCAGAAGTTGGAC----AAGAGTCCAGCCCCGCTTA--T 671059
Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACT 244
|| ||||||||||||| || || |||||||||||||||| |||||||| ||||||||
Sbjct 671058 GAGTAAGTAAAAAAACAATGAGAGTAGTGGTATTTCACTGGCGCCGAA---GCTCCCACC 671002
Query 245 TATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCT 304
||| |||||||||||| ||| |||||| | ||| |||||||||||||||||||||||||
Sbjct 671001 TATCCTACACCTCTCATGTCTTTTCACCATGTCAAACTAGAGTCAAGCTCAACAGGGTCT 670942
Query 305 TCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 364
||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct 670941 TCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATGGTAGA 670882
Query 365 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 424
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 670881 TAGGGACAGTGGGAATCTCGTTGATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 670822
Query 425 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTT 484
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 670821 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTC 670762
Query 485 CTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct 670761 CATCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGCCAACACCACTTTCTG 670703
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635199525792
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