Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knoxdaviesia_20capensis_20[genbank_20GCA_5F001510575.1_202016-01-11] 29 sequences; 35,537,816 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq23 774 0.0 >seq23 Length=4176071 Score = 774 bits (858), Expect = 0.0 Identities = 497/539 (92%), Gaps = 11/539 (2%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 661929 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATG 661870 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || Sbjct 661869 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCCTCAACCCGGGTC 661810 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGA--CCAGTTCCGCTTCATT 184 ||||||||||||||||||||||||||| ||| | |||| |||| |||||| | Sbjct 661809 GGCCCGCGAAGGACCTTAACGCCAGAAGTTGGAC----AAGAGTCCAGCCCCGCTTA--T 661756 Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACT 244 || ||||||||||||| || || |||||||||||||||| |||||||| |||||||| Sbjct 661755 GAGTAAGTAAAAAAACAATGAGAGTAGTGGTATTTCACTGGCGCCGAA---GCTCCCACC 661699 Query 245 TATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCT 304 ||| |||||||||||| ||| |||||| | ||| ||||||||||||||||||||||||| Sbjct 661698 TATCCTACACCTCTCATGTCTTTTCACCATGTCAAACTAGAGTCAAGCTCAACAGGGTCT 661639 Query 305 TCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 364 ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| Sbjct 661638 TCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATGGTAGA 661579 Query 365 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 424 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 661578 TAGGGACAGTGGGAATCTCGTTGATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 661519 Query 425 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTT 484 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 661518 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTC 661459 Query 485 CTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 | ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct 661458 CATCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGCCAACACCACTTTCTG 661400 Score = 774 bits (858), Expect = 0.0 Identities = 497/539 (92%), Gaps = 11/539 (2%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 671232 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATG 671173 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || Sbjct 671172 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCCTCAACCCGGGTC 671113 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGA--CCAGTTCCGCTTCATT 184 ||||||||||||||||||||||||||| ||| | |||| |||| |||||| | Sbjct 671112 GGCCCGCGAAGGACCTTAACGCCAGAAGTTGGAC----AAGAGTCCAGCCCCGCTTA--T 671059 Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACT 244 || ||||||||||||| || || |||||||||||||||| |||||||| |||||||| Sbjct 671058 GAGTAAGTAAAAAAACAATGAGAGTAGTGGTATTTCACTGGCGCCGAA---GCTCCCACC 671002 Query 245 TATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCT 304 ||| |||||||||||| ||| |||||| | ||| ||||||||||||||||||||||||| Sbjct 671001 TATCCTACACCTCTCATGTCTTTTCACCATGTCAAACTAGAGTCAAGCTCAACAGGGTCT 670942 Query 305 TCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 364 ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| Sbjct 670941 TCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATGGTAGA 670882 Query 365 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 424 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 670881 TAGGGACAGTGGGAATCTCGTTGATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 670822 Query 425 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTT 484 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 670821 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTC 670762 Query 485 CTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 | ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct 670761 CATCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGCCAACACCACTTTCTG 670703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635199525792