Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knoxdaviesia_20capensis_20[genbank_20GCA_5F001510575.1_202016-01-11] 29 sequences; 35,537,816 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq23 726 0.0 >seq23 Length=4176071 Score = 726 bits (804), Expect = 0.0 Identities = 464/504 (92%), Gaps = 1/504 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 666751 GTACTCATTCCGATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 666692 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct 666691 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTAGATGTAGTAGCCGTT 666632 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||| ||||||| |||| |||||| | ||||||||||||| |||||| | Sbjct 666631 TCTCAGGCTCCTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGTAACCATGCGA 666572 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 | || | | | |||||||||||||||||| |||||||||||||||||||||||||| Sbjct 666571 AGACAAGACCTTCGCATCGAAAGTTGATAGGGAAGAAATTTGAATGAACCATCGCCGGCG 666512 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||| Sbjct 666511 CAAGGCCATGCGATTCGAGAAGTTATCATGAATCACCAAGGAGCCCCGAAGGGCATTGGT 666452 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 ||| |||||||||||||| |||||||||||| ||| ||||||||||||||||||||||| Sbjct 666451 CTTTAATCTAATAAATACATCCCTTCCGAAGTTGGGATTTTTAGCATGTATTAGCTCTAG 666392 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 |||||||||||||||||| |||||||||| |||||||||||||||||||| || |||||| Sbjct 666391 AATTACCACGGTTATCCAAGTAGTAAGGTGCTATCAAATAAACGATAACTTATATAATGA 666332 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||| Sbjct 666331 GCCATTCGCAGTTTCGCCGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 666273 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 666272 AGACAAGCATATGACTACTGGCAG 666249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510399561984