Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20capensis_20[genbank_20GCA_5F001510575.1_202016-01-11]
29 sequences; 35,537,816 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq2 320 1e-82
seq9 206 2e-48
>seq2
Length=2210479
Score = 320 bits (354), Expect = 1e-82
Identities = 1213/1880 (65%), Gaps = 54/1880 (3%)
Strand=Plus/Minus
Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137
|| || ||||||||||| | ||||| |||| ||| | || |||||||||||||||
Sbjct 1078781 TCAACAGTGAACTGGATAGGCGCCGCAGCAGCCTGGGTACGGAGGTAGTACATGCCGGTC 1078722
Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCTC 65196
||||| ||| ||| | ||| ||||| | || | || |||| | | || ||
Sbjct 1078721 TTGAGACCAAGCTTCCAGCCGGTGAAGTGCAT-GCTGGTGATCTTGCCCATCGTGGGGTC 1078663
Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256
|| || || |||| ||||| ||| || ||| || ||||||||| ||||||||
Sbjct 1078662 CTTCATGTGGATGTTCAGAGACTGCGACTGGTCAATGAAAGCACCACGATCGGCAGCCAT 1078603
Query 65257 GTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCAA 65315
| | || | || || || |||||||| ||||||||||| | | | | |||
Sbjct 1078602 CTGCACGACAGTGCGCTGGGAAATTTCCCAGACCGTCTTGTACAGA-GCCTTGATGTCAG 1078544
Query 65316 TTGGAATCTCCTCAATGTCCTGGACTGAACCAC-GACGTGCAATAATGCGATTACGCATC 65374
|| || |||||| ||||| || || | || ||||| ||||| || ||||
Sbjct 1078543 CAGGGATGCTGGCAATGTTCTGGATCGAGCCGTTGTCG-GCAATGATGCGGTTCTTCATC 1078485
Query 65375 GACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGG 65434
|| || ||||||| || | |||| |||| | | ||| | |||| || |||
Sbjct 1078484 GAGTCCGACCACAGGCCAAGGTCGACTAGATCGCGGAGCAACCACGGGTTGACCACCTGG 1078425
Query 65435 AACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCA 65494
||||| || | || ||||| || ||||| ||||| ||| || |||||| | ||
Sbjct 1078424 AACTCTCCAGCAAGCACACGGCGCTGGTAGATATTGGAGGTGTACGGCTCAAAGCACTCG 1078365
Query 65495 GTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTT 65554
||||||| ||||| || | ||| ||||| ||||||||||| | || || |||
Sbjct 1078364 TTGTTGCCAAGAATCTGCGAGGTACTGGCAGTGGGCATGGGAGCCAGCAGCAGACTGTTG 1078305
Query 65555 CGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTATCG 65614
|| | |||| | | || | | || ||||||| ||| | ||| | |
Sbjct 1078304 CGAACACCGTGAAGCTTGATCTGCTCCTTCAGGCTATCCCAGTCCCAGA--GGTCGGTGG 1078247
Query 65615 TC--GACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGA 65672
| ||||| | ||||| || |||||| | || | | | || || ||
Sbjct 1078246 GCTTGACATTC------CACATGTCAAACTGCAGGATACCCTGAGAGACGGGAGAGCCCT 1078193
Query 65673 GGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCT-GGTCTCGAGTGCGGCA 65731
| | ||| ||||||||||||||| | | || | || | || || ||
Sbjct 1078192 CATAGGTGGAGTAGGTTCCCTCCTCCTTGGCGATCTC-CACCGAGGCCGACAGAGCAGCG 1078134
Query 65732 AAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGC 65791
|| ||||||||||| || | | || || || || ||||| || ||| | |||
Sbjct 1078133 TGGTAGATGGTCTCGAAGATCTGCTGGTTCAGCTCCCGAGCCTCGGCGGACTCAAAGGGC 1078074
Query 65792 ATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGA 65851
|| | || || |||| ||||| ||||| ||||| |||| ||||||||| || ||
Sbjct 1078073 ATGCGCAGAGCGAGGAAAGCATCGGCAAGACCCTGAACACCAACACCGATGGGGCGGTGG 1078014
Query 65852 CGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTC 65911
|||| ||| | ||||| || || ||||||| |||| ||| || ||||| |||
Sbjct 1078013 CGCATGTTGCTGTTGCGAGCCTCGGGCACGGGGTAGTGGTTGACATCAATGATGCGGTTC 1077954
Query 65912 AAATTGCGTGTCACCACATGCACGAT-ACGTCG--CAATTGTTCGAAATCAAAATGTTTA 65968
| ||||| ||||| || | | || ||| || | || || ||| |
Sbjct 1077953 AGGTTGCGGACAACCAC---CATGGTGACCTCGTGCAGCTTCTCAAAGTCATAC------ 1077903
Query 65969 GGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAG 66028
||| | || | | | || | ||| || || || || || ||||||||
Sbjct 1077902 --ACGCCCT----TGTTGTAGTCAACGTAGGCGGGCAGAGCGAGGGAGGCCAGGTTGCAC 1077849
Query 66029 ACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGT 66088
||||| | ||| || |||||| ||||| | || || |||||||| || || |||
Sbjct 1077848 ACAGCCACCTCATCGGGAGCGCAGTACTCAATGATCTCTGTGCACAGGTTGGAGCTGCGA 1077789
Query 66089 ATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTAC 66148
||||| |||| |||| || || |||||||| ||||| |||||||||| |||| |
Sbjct 1077788 ATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAGCATGAAG 1077729
Query 66149 GGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACC 66208
|| |||||||||| || | ||| | |||||||| ||| || | ||||| |
Sbjct 1077728 GGGTTGCCGGTCTCGGTCTGAGCCTCGAGGATGGCGTACCACAGCTTCTGAGCCTTGATG 1077669
Query 66209 GTACGTACCGCC-CTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACC 66267
|| | | | || | ||| | ||||| | ||||| ||| ||||| || ||
Sbjct 1077668 GT-CTTGCGACCGCGACCCTCAGCCTCGTACTTCTCGTACAGGGCCTCGAACTCCTCGCC 1077610
Query 66268 CCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTG 66327
| |||| |||| || |||| || || |||||||| | ||| || | | ||
Sbjct 1077609 GTAGCAGTCGGCAAGACCGGGGCACTCGTTGGGGCACATCAGAGTCCACTCGGCGTTCTT 1077550
Query 66328 TTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCG 66387
|| || || ||| || ||||| || ||||| || || ||| | ||| | || ||
Sbjct 1077549 CTCGACTCGCTTCATGAAGAGATCGGGGATCCACAGAGCCAGGAACAAATCTCTGGCGCG 1077490
Query 66388 TTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCA 66447
|||||| | || ||||| ||||||| || | |||||| || | |||||| |||||
Sbjct 1077489 GACCTCCTCCTTTCCATGATTCTTGCGCAGATCCATGAACTCGAACACGTCGGCGTGCCA 1077430
Query 66448 TGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCG 66507
|| || ||||||||||| || | ||| || ||| ||| || ||||| || |||||
Sbjct 1077429 CGGCTCGAGGTAGATGGCAAAGGCGCCGGGGCGCTTGTTGCCGCCCTGGTCAACATAGCG 1077370
Query 66508 AGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCC 66567
||| |||||||| || || | ||| || | || || || || |||||||||| ||
Sbjct 1077369 GGCGGTGTTGTTGAACACGCGAAGCATGGGGATGATACCATTGGACGTGCCATTGGTTCC 1077310
Query 66568 GTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGT 66627
| | || || || || || ||| ||| ||||| |||||||| ||||| ||| |
Sbjct 1077309 GGCAATATAAGAACCGGTAGCACGGATACGGTGGACATTGAGACCAATGCCACCAGCCAT 1077250
Query 66628 CTTCGAGATGGCAGCACA-ATC-GGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCC 66685
||| ||||| || || || | |||| | || || |||||| |||| ||
Sbjct 1077249 CTTGGAGATCATGGCGCAGGTCTTGAGGGTGTC--ATAGATACCCTCAATGCTGTCATCC 1077192
Query 66686 TTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGG 66745
|| ||| | ||| |||| || || |||| | || || | || |||||||
Sbjct 1077191 TTCATGTCAACCAGGAAGCACGACGAGAGCTGGGCCTGCGGGGTACCAGCGTTGAAGAGG 1077132
Query 66746 GTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCA 66805
||||| | || || || ||| | | || ||||| | ||||| ||||||||||||
Sbjct 1077131 GTGGGGGAGGCATGGGTGAAGAACTTGCTGGACATCAAGTTGTAGGTCTCGATGACACGC 1077072
Query 66806 TCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCG 66865
|| | ||| || || || || | ||| ||||| | | || || || || |||
Sbjct 1077071 TCGACGTTGTCTCCCCAGATGCCAACAGCAACACGCATGATCATGTGCTGGGGGCGCTCG 1077012
Query 66866 ACCA----GCCG--ATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCA 66919
|| | |||| | ||||| || | ||| || || || |||||||||| |||
Sbjct 1077011 ACAATCTTGCCGTCAAGCTTGA---GC---AGGTAAGACCGCTCTAGGGTCTTGAAGCCA 1076958
Query 66920 AAGTACGAGTAATTGAAATC 66939
|||||| ||| ||||| ||
Sbjct 1076957 AAGTACTGGTAGTTGAAGTC 1076938
>seq9
Length=477563
Score = 206 bits (228), Expect = 2e-48
Identities = 573/862 (66%), Gaps = 34/862 (4%)
Strand=Plus/Minus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||| ||||| || || || |||||||||| |||||| |||| ||
Sbjct 52250 ATCTGGCAGATGTACAAGAAGGCTGAGGCCTCGTTCTGGACGGCCGAGGAGATCGACCTG 52191
Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAA- 61202
||||| || || |||||||| | || || | || ||| | | |||| | |
Sbjct 52190 TCCAAGGATATCCATGACTGGAACAACCGCCTAAC---CGATGACGAGCGTTTCTTCATC 52134
Query 61203 ----ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGG 61258
|||| | ||| | ||||| ||||| || ||||| || ||||| ||||| | | |
Sbjct 52133 TCGCACAT-TCTTGCC-TTCTTCGCCGCGTCTGACGGCATTGTCAACGAGAACCTGGTCG 52076
Query 61259 AACGTTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATT 61317
| |||||| |||| | ||||||| ||| | ||||| || || |||||||||||||||||
Sbjct 52075 AGCGTTTCAGCGCCG-AGGTGCAGGTGCCTGAGGCCCGCTGCTTCTACGGCTTCCAGATC 52017
Query 61318 GCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAG 61377
|||||||| ||||||| |||| ||| | ||||| || || ||||||| ||||
Sbjct 52016 ATGATGGAGAACATCCACTCCGAGACCTACTCGCTGCTCATTGACACCTACATCAAGGAG 51957
Query 61378 CGGGCGGAACGTGAACGAT--TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCG-- 61433
| || | | | || | | ||||| ||||| || || || || | | | ||
Sbjct 51956 CCCTCGCA--GCGCACCTTCCTCTTCAACGCCATTGACACCATCCC--CTG-CATCCGCA 51902
Query 61434 -GAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAA--CGGCTACATTTGGTGAACG 61490
||| || || |||||| || ||||| ||| |||| | | | | || | ||
Sbjct 51901 AGAAGGCCGACTGGGCCATCCGCTGGAT--TCAGGACAAGGAGTCGTCCTACGGCCAGCG 51844
Query 61491 ATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTT 61550
|| | || ||||| | |||||||| | || ||||| || | || | | |||||
Sbjct 51843 CCTGGTTGCCTTTGCCGCCGTCGAGGGCATCTTCTTCAGCGGTGCCTTCTCGTCGATCTT 51784
Query 61551 TTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACG 61610
||| | ||||| || || | |||||||| ||||||||| ||| ||| |||| || ||
Sbjct 51783 CTGGATCAAGAAGCGCGGCATGATGCCCGGCCTGACCTTCTCCAACGAGCTGATCTCGCG 51724
Query 61611 CGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCG 61670
|||||||| |||| || || || |||| ||| | | || | | ||
Sbjct 51723 TGACGAGGGTCTGCACACCGACTTCGCCTGCCTGCTCTTC---TCCCACCTCAAGCACCG 51667
Query 61671 TCCGTCGGAGGAGCGTGTGGGTGAGATTGTTC-GTGAGGCGGTAACTATCGAACAGGAAT 61729
|| |||| ||| |||| | || || || || | || || ||||| |
Sbjct 51666 CCCCAGCAAGGA-CGTCATCCAGAGAATCATCACCGATGCCGTGGCCATTGAGCAGGAGT 51608
Query 61730 TTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGT 61789
| | || || ||| ||||| | | || | |||||||| || ||| |||||
Sbjct 51607 TCATCACCGAGGCTCTGCCCTGCGCCCTGCTGGGCATGAACGCCACCCTGATGAAGCAGT 51548
Query 61790 ATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATA 61849
| || || || || |||||||| ||| |||| | | | || | | | |||| ||
Sbjct 51547 ACATCGAGTTCGTCGCCGACCGCCTGCTGGTGGCTCTCGGCAACGACAAGGTCTACAAGG 51488
Query 61850 CGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCG 61909
| | ||||| || || |||||||| | || ||||||| |||||||| || || || |
Sbjct 51487 CCACCAACCCCTTCGACTTCATGGAGAACATCTCGCTGGGCGGCAAGACCAACTTCTTTG 51428
Query 61910 AGAAACGTGTAGGCGACTATCA 61931
|||| ||||| |||||||| ||
Sbjct 51427 AGAAGCGTGTTGGCGACTACCA 51406
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567859484560
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