Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11] 133 sequences; 35,489,142 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq115 428 8e-118 >seq115 Length=8229 Score = 428 bits (474), Expect = 8e-118 Identities = 285/314 (91%), Gaps = 2/314 (1%) Strand=Plus/Minus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 |||||||||||||||||||| |||| ||| | |||||||||| |||||| ||| ||| | Sbjct 6666 TGGTCCGGCCGGGCCTTTCCCTCTGTGGAACTGCATGCCCTTTACTGGGCGTGTAGGGAA 6607 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 | ||||||||||||||||||||||||||||| || | |||||| | ||||||||||| | Sbjct 6606 AC-AGGACTTTTACTTTGAAAAAATTAGAGTGCTCCAGGCAGGCATATGCTCGAATACTT 6548 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 6547 CAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 6488 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct 6487 AATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 6428 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 || |||||||||||||||||||||||||| || ||||||||||||||||| || || || Sbjct 6427 ATCTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTGATAAG-GA 6369 Query 305 ACGAAAGTTAGGGG 318 |||||||||||||| Sbjct 6368 ACGAAAGTTAGGGG 6355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915198782784