Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11]
133 sequences; 35,489,142 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq115 632 8e-179
>seq115
Length=8229
Score = 632 bits (700), Expect = 8e-179
Identities = 549/671 (82%), Gaps = 9/671 (1%)
Strand=Plus/Minus
Query 15 CCTAGCCGT-GTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGG 73
|| |||||| ||| ||||||||| ||||||||||| |||||||||||| |||||||||||
Sbjct 4363 CCGAGCCGTTGTGTAGCTCCTTCAACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGG 4304
Query 74 GAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTG 133
|||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 4303 GAGGTATATCTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTG 4244
Query 134 ATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGG 193
||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct 4243 ATCGAAAGATGAAAAGCACTTTGAAAAGAGAGTTAAACAGCACGTGAAATTGTTGAAAGG 4184
Query 194 GAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCC-CTCGGCCGGTGCACT 252
|||||||||| |||||||||| | | || | | | || ||| || || |||
Sbjct 4183 GAAGCGCTTGTGACCAGACTTGTGCCCGGTGAATTAGCTGGTGTTCTCA-CCAGTCGACT 4125
Query 253 CTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCC 312
| | | | ||||||||||||| | | | ||| ||| | |||||||||||
Sbjct 4124 TTGCCG-GCTCAGGCCAGCATCGGTTTGTTATTGGGGAGAAAAACGATGGGAATGTGGCT 4066
Query 313 CCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC 372
|| |||||| | |||||||||||| || ||| | | | | || |||| ||||||
Sbjct 4065 CC-TTCGGGAG-TGTTATAGCCCGCCGTATAATACCCTTTGGCAG-ACCGAGGACCGCGC 4009
Query 373 TCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGA 432
| || |||||||||||||||||| |||| ||||||||| |||||||||||||||
Sbjct 4008 ATCTGCATGGATGCTGGCGTAATGGTCACCAGCGACCCGTCTTGAAACACGGACCAAGGA 3949
Query 433 GTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGA 492
||| | | | | ||| ||||||||||||| |||||| | |||| ||| || ||||||| |
Sbjct 3948 GTCAACCTTATGTGCAAGTGTTTGGGTGTTAAACCCCTACGCGGAATTAACGTGAACGTA 3889
Query 493 GGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGT 552
|||| || || | ||| ||| ||||||||||| ||||||| ||||||||||||||||
Sbjct 3888 GGTGAGAGCC--TTCGGGCGCATCATCGACCGATTCTGATGTTCTCGGATGGATTTGAGT 3831
Query 553 AAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAG 612
||||||| | | | |||||||||||| |||||||||||| || |||||||||||||||
Sbjct 3830 AAGAGCACACAGGGTTGGACCCGAAAGAAGGTGAACTATGCTTGTATAGGGTGAAGCCAG 3771
Query 613 AGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGG 672
||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |
Sbjct 3770 AGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGAG 3711
Query 673 TATAGGGGCGA 683
|| |||||||
Sbjct 3710 CATGGGGGCGA 3700
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079997147150
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |