Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11] 133 sequences; 35,489,142 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq115 632 8e-179 >seq115 Length=8229 Score = 632 bits (700), Expect = 8e-179 Identities = 549/671 (82%), Gaps = 9/671 (1%) Strand=Plus/Minus Query 15 CCTAGCCGT-GTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGG 73 || |||||| ||| ||||||||| ||||||||||| |||||||||||| ||||||||||| Sbjct 4363 CCGAGCCGTTGTGTAGCTCCTTCAACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGG 4304 Query 74 GAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTG 133 |||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 4303 GAGGTATATCTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTG 4244 Query 134 ATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGG 193 ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| Sbjct 4243 ATCGAAAGATGAAAAGCACTTTGAAAAGAGAGTTAAACAGCACGTGAAATTGTTGAAAGG 4184 Query 194 GAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCC-CTCGGCCGGTGCACT 252 |||||||||| |||||||||| | | || | | | || ||| || || ||| Sbjct 4183 GAAGCGCTTGTGACCAGACTTGTGCCCGGTGAATTAGCTGGTGTTCTCA-CCAGTCGACT 4125 Query 253 CTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCC 312 | | | | ||||||||||||| | | | ||| ||| | ||||||||||| Sbjct 4124 TTGCCG-GCTCAGGCCAGCATCGGTTTGTTATTGGGGAGAAAAACGATGGGAATGTGGCT 4066 Query 313 CCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC 372 || |||||| | |||||||||||| || ||| | | | | || |||| |||||| Sbjct 4065 CC-TTCGGGAG-TGTTATAGCCCGCCGTATAATACCCTTTGGCAG-ACCGAGGACCGCGC 4009 Query 373 TCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGA 432 | || |||||||||||||||||| |||| ||||||||| ||||||||||||||| Sbjct 4008 ATCTGCATGGATGCTGGCGTAATGGTCACCAGCGACCCGTCTTGAAACACGGACCAAGGA 3949 Query 433 GTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGA 492 ||| | | | | ||| ||||||||||||| |||||| | |||| ||| || ||||||| | Sbjct 3948 GTCAACCTTATGTGCAAGTGTTTGGGTGTTAAACCCCTACGCGGAATTAACGTGAACGTA 3889 Query 493 GGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGT 552 |||| || || | ||| ||| ||||||||||| ||||||| |||||||||||||||| Sbjct 3888 GGTGAGAGCC--TTCGGGCGCATCATCGACCGATTCTGATGTTCTCGGATGGATTTGAGT 3831 Query 553 AAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAG 612 ||||||| | | | |||||||||||| |||||||||||| || ||||||||||||||| Sbjct 3830 AAGAGCACACAGGGTTGGACCCGAAAGAAGGTGAACTATGCTTGTATAGGGTGAAGCCAG 3771 Query 613 AGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGG 672 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || | Sbjct 3770 AGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGAG 3711 Query 673 TATAGGGGCGA 683 || ||||||| Sbjct 3710 CATGGGGGCGA 3700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079997147150