Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11]
133 sequences; 35,489,142 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq18 136 1e-29
>seq18
Length=9657
Score = 136 bits (150), Expect = 1e-29
Identities = 203/286 (71%), Gaps = 19/286 (7%)
Strand=Plus/Plus
Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66
|| |||| |||| ||||| ||| ||| ||||||||| | | ||||||||
Sbjct 180 TAAACTGTATCTGCACAGTTATTCCAAGTTCACTGAGCCAATCATAGAGACAGCTGTTGT 239
Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126
|||||||| ||||| |||| | | | | ||| | | ||||| |||||||||||||||||
Sbjct 240 ATCGTTACATCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGA 299
Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGC---TTCGC------- 176
|| | | |||| |||||||||||||||||| ||| |||| | | || |
Sbjct 300 CCCTCA-CGTTAAGGCCGCCGTTTACCGGGGGTTCCGTCAATACCAAACTCCCTAAAAAA 358
Query 177 --GTTAGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGT 234
|||| || ||| |||||| |||||||||||||| | |||||| | |||| |
Sbjct 359 AGTTTAGTTA----TATCTGTTAACCAGCCGGCACCGGGCAGACATCACACTCAATACTT 414
Query 235 CCACTTTCGTGTT--TGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278
| ||| | || |||| ||||||||||||| | ||||||||||
Sbjct 415 AGATTTTAATCTTTATGCAAAGTGCTGTGTTTTAATTAAACAGTCG 460
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260798323136
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |