Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11]
133 sequences; 35,489,142 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq115 268 1e-69
>seq115
Length=8229
Score = 268 bits (296), Expect = 1e-69
Identities = 179/198 (90%), Gaps = 1/198 (1%)
Strand=Plus/Plus
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
||||||||||||||||||||||||| |||| || ||| ||||||||||||||||||||||
Sbjct 5914 ACCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCAGC 5972
Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180
| | || || | |||||||||||||||||||||||||||||||||||| |||||
Sbjct 5973 GAACTGCCGAAGCAGTACGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTA 6032
Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240
| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 6033 AGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAGAATCAAGA 6092
Query 241 AAGAGCTATCAATCTGTC 258
||||||| ||||||||||
Sbjct 6093 AAGAGCTCTCAATCTGTC 6110
Score = 98.7 bits (108), Expect = 2e-18
Identities = 57/59 (97%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5451 ACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 5509
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796798973373
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |