Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11] 133 sequences; 35,489,142 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq115 268 1e-69 >seq115 Length=8229 Score = 268 bits (296), Expect = 1e-69 Identities = 179/198 (90%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||||||||||||| |||| || ||| |||||||||||||||||||||| Sbjct 5914 ACCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCAGC 5972 Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 | | || || | |||||||||||||||||||||||||||||||||||| ||||| Sbjct 5973 GAACTGCCGAAGCAGTACGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTA 6032 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 6033 AGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAGAATCAAGA 6092 Query 241 AAGAGCTATCAATCTGTC 258 ||||||| |||||||||| Sbjct 6093 AAGAGCTCTCAATCTGTC 6110 Score = 98.7 bits (108), Expect = 2e-18 Identities = 57/59 (97%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5451 ACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 5509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796798973373