Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11]
133 sequences; 35,489,142 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq115 333 5e-89
>seq115
Length=8229
Score = 333 bits (368), Expect = 5e-89
Identities = 198/206 (96%), Gaps = 1/206 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||| |||||||||||| | ||| | ||||||||||||||||||||||||||||||
Sbjct 1106 TACTAAGCTGAATTACCATTGCGACGA-GTTCATCAGTAGGGTAAAACTAACCTGTCTCA 1164
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1165 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 1224
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1225 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAT 1284
Query 181 GAACGCTTGGCTGCCACAAGCCAGTT 206
||||||||||| ||||||||||||||
Sbjct 1285 GAACGCTTGGCCGCCACAAGCCAGTT 1310
Score = 138 bits (152), Expect = 2e-30
Identities = 89/96 (93%), Gaps = 1/96 (1%)
Strand=Plus/Plus
Query 201 CCAGTT-ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAA 259
|||||| ||||||||||||||||||||||||||| || ||||| || ||||||| ||||
Sbjct 1817 CCAGTTTATCCCTGTGGTAACTTTTCTGGCACCTATAACCTCAGATCTCGAGGGTTTAAA 1876
Query 260 GGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
||||||||||||||||||||||||||||||||||||
Sbjct 1877 GGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 1912
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854398863648
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |