Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11]
133 sequences; 35,489,142 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq60 289 2e-73
seq58 228 6e-55
>seq60
Length=1285956
Score = 289 bits (320), Expect = 2e-73
Identities = 1204/1879 (64%), Gaps = 52/1879 (3%)
Strand=Plus/Plus
Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137
|| || |||||||| || | ||||| |||| ||| | || |||||||||||||||
Sbjct 692458 TCAACAGTGAACTGAATAGGCGCCGCAGCAGCCTGGGTACGGAGGTAGTACATGCCGGTC 692517
Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCTC 65196
||||| ||| ||| | ||| ||||| | || | || |||| | | || ||
Sbjct 692518 TTGAGACCAAGCTTCCAGCCGGTGAAGTGCAT-GCTGGTGATCTTGCCCATCGTGGGGTC 692576
Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256
|| || || |||| ||||| ||| || ||| || |||||| || || |||||
Sbjct 692577 CTTCATGTGGATGTTCAGAGACTGCGACTGGTCAATGAAAGCACCACGGTCGGCTGCCAT 692636
Query 65257 GTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCAA 65315
| | | | || || || |||||||| ||||||||||| | | | | |||
Sbjct 692637 CTGCACAACAGTGCGCTGGGAAATTTCCCAGACCGTCTTGTACAGA-GCCTTGATGTCAG 692695
Query 65316 TTGGAATCTCCTCAATGTCCTGGACTGAACCAC-GACGTGCAATAATGCGATTACGCATC 65374
|| || |||||| ||||| || || | || ||||| ||||| || ||||
Sbjct 692696 CAGGGATGCTGGCAATGTTCTGGATCGAGCCGTTGTCG-GCAATGATGCGGTTCTTCATC 692754
Query 65375 GACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGG 65434
|| || ||||||| || | |||| |||| | | ||| | |||| || |||
Sbjct 692755 GAGTCCGACCACAGGCCAAGGTCGACGAGATCGCGGAGCAACCACGGGTTGACCACCTGG 692814
Query 65435 AACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCA 65494
||||| || | || ||||| || ||||||||||| ||| || |||||| | ||
Sbjct 692815 AACTCTCCAGCAAGCACACGGCGCTGGTAGATGTTGGAGGTGTACGGCTCAAAGCACTCG 692874
Query 65495 GTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTT 65554
||||||| ||||| || | ||| ||||| ||||||||||| | || || |||
Sbjct 692875 TTGTTGCCAAGAATCTGCGAGGTACTGGCAGTGGGCATGGGAGCCAGCAGCAGACTGTTG 692934
Query 65555 CGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACA--TCGGTTTAT 65612
|| | |||| | | || | | || ||||||| ||| | |||| |
Sbjct 692935 CGAACACCGTGAAGCTTGATCTGCTCCTTCAGGCTATCCCAGTCCCAGAGGTCGG--TGG 692992
Query 65613 CGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGA 65672
| ||||| |||||| || |||||| | || | | | || || ||
Sbjct 692993 GCTTGACAT------TCCACATGTCAAACTGCAGGATACCCTGAGAGACGGGAGAGCCCT 693046
Query 65673 GGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAA 65732
| | ||| ||||||||||||||| | | | || | || || ||
Sbjct 693047 CATAGGTGGAGTAGGTTCCCTCCTCCTTGGCGATCTCCACGGAGGCCGACAGAGCAGCGT 693106
Query 65733 AATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCA 65792
|| ||||||||||| || | | || || || || ||||| || ||| | ||||
Sbjct 693107 GGTAGATGGTCTCGAAGATCTGCTGGTTCAGCTCCCGAGCCTCGGCGGACTCAAAGGGCA 693166
Query 65793 TACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGAC 65852
| | || || |||| || |||||||| ||||| |||| ||||||||| || || |
Sbjct 693167 TGCGCAGAGCGAGGAAAGCATCAGCCAGACCCTGAACACCAACACCGATGGGGCGGTGGC 693226
Query 65853 GCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCA 65912
||| ||| | ||||| || || ||||||| |||| ||| || ||||| ||||
Sbjct 693227 GCATGTTGCTGTTGCGAGCCTCGGGCACGGGGTAGTGGTTGACATCAATGATGCGGTTCA 693286
Query 65913 AATTGCGTGTCACCA-CATGCACGATACGTC--GCAATTGTTCGAAATCAAAATGTTTAG 65969
||||| |||| |||| | || || ||| | || || ||| |
Sbjct 693287 GGTTGCGGACAACCACCATG---GTGACCTCGTGCAGCTTCTCAAAGTCATA-------- 693335
Query 65970 GACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGA 66029
||| | || | | | ||| | ||| || || || || || |||||||| |
Sbjct 693336 CACGCCC----TTGTTGTAGTCAACATAGGCGGGCAGAGCGAGGGAGGCCAGGTTGCACA 693391
Query 66030 CAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTA 66089
|||| | ||| || |||||| ||||| | || || |||||||| || || ||| |
Sbjct 693392 CAGCCACCTCATCGGGAGCGCAGTACTCAATGATCTCAGTGCACAGGTTGGAGCTGCGAA 693451
Query 66090 TGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACG 66149
|||| |||| |||| || || |||||||| || || |||||||||| |||| | |
Sbjct 693452 TGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTACAGTGGTCCTTGTACAGCATGAAGG 693511
Query 66150 GAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCG 66209
| |||||||||| || | ||| | |||||| | ||| || | ||||| | |
Sbjct 693512 GGTTGCCGGTCTCGGTCTGAGCCTCGAGGATGGCATACCACAGCTTCTGAGCCTTGATGG 693571
Query 66210 TACGTACCGCC-CTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCC 66268
| | | | || | ||| | ||||| | ||||| ||| ||||| || ||
Sbjct 693572 T-CTTGCGACCGCGACCCTCAGCCTCGTACTTCTCGTACAGGGCCTCGAACTCCTCGCCG 693630
Query 66269 CATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGT 66328
| |||| |||| || |||| || || |||||||| | ||| || | | ||
Sbjct 693631 TAGCAGTCGGCAAGACCGGGGCACTCGTTGGGGCACATCAGAGTCCACTCGGCGTTCTTC 693690
Query 66329 TCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGT 66388
|| ||||| ||| || |||||||| ||||| || || ||| | ||| | || ||
Sbjct 693691 TCGACACGCTTCATGAAGAGATCAGGGATCCACAGAGCCAGGAACAAATCTCTGGCGCGG 693750
Query 66389 TGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCAT 66448
|||||| | || || || ||||||| || | |||||| || | ||||| |||||
Sbjct 693751 ACCTCCTCCTTTCCATGGTTCTTGCGCAGATCCATGAACTCGAACACATCGGCGTGCCAC 693810
Query 66449 GGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGA 66508
|| || || |||||||| || | ||| || ||| |||||| ||||| || |||||
Sbjct 693811 GGCTCGAGATAGATGGCAAAGGCGCCGGGGCGCTTGTTGCCACCCTGGTCAACATAGCGC 693870
Query 66509 GCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCG 66568
||| |||||||| || || | ||| || | || || || || |||||||||| |||
Sbjct 693871 GCGGTGTTGTTGAACACTCGAAGCATGGGGATGATACCATTGGACGTGCCATTGGTTCCG 693930
Query 66569 TCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTC 66628
| || || || || || ||| ||| ||||| |||||||| || || ||| ||
Sbjct 693931 GCAATATAAGAACCAGTAGCACGGATACGGTGGACATTGAGACCAATGCCGCCAGCCATC 693990
Query 66629 TTCGAGATGGCAGCACA-ATC-GGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCT 66686
|| ||||| || || || | |||| | || || |||||| |||| |||
Sbjct 693991 TTGGAGATCATGGCGCAGGTCTTGAGGGTGTC--ATAGATACCCTCAATGCTGTCATCCT 694048
Query 66687 TGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGG 66746
| || | ||| |||| || || |||| | || || | || ||||||||
Sbjct 694049 TTATATCAACCAGGAAGCACGACGAGAGCTGGGCCTGCGGGGTACCAGCGTTGAAGAGGG 694108
Query 66747 TGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCAT 66806
|||| | || || || ||| | | || ||||| | ||||| ||||| ||||| |
Sbjct 694109 TGGGGGAGGCATGGGTGAAGAACTTGCTGGACATCAAGTTGTAGGTCTCAATGACGCGCT 694168
Query 66807 CAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGA 66866
| | ||| || || || || | ||| ||||| | | || || || || ||||
Sbjct 694169 CGACGTTGTCTCCCCAGATGCCAACAGCAACACGCATGATCATGTGCTGGGGGCGCTCGA 694228
Query 66867 CCA----GCCG--ATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAA 66920
| | |||| | ||||| || | ||| || || ||||||||||||| ||||
Sbjct 694229 CAATCTTGCCGTCAAGCTTGA---GC---AGGTAAGACCGCTCCAGGGTCTTGAAGCCAA 694282
Query 66921 AGTACGAGTAATTGAAATC 66939
||||| ||| ||||| ||
Sbjct 694283 AGTACTGGTAGTTGAAGTC 694301
>seq58
Length=769140
Score = 228 bits (252), Expect = 6e-55
Identities = 578/862 (67%), Gaps = 34/862 (4%)
Strand=Plus/Plus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||| ||||| || || || |||||||||| |||||| |||| ||
Sbjct 627644 ATCTGGCAGATGTACAAGAAGGCTGAGGCCTCGTTCTGGACGGCCGAGGAGATCGACCTG 627703
Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAA- 61202
||||| || || |||||||| | || | || || ||| | | |||| | |
Sbjct 627704 TCCAAGGATATCCATGACTGGAACAACCGCCT---GAACGATGACGAGCGTTTCTTCATC 627760
Query 61203 ----ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGG 61258
|||| | ||| | ||||| ||||| || ||||| || ||||| ||||| | | |
Sbjct 627761 TCGCACAT-TCTTGCC-TTCTTCGCCGCGTCTGACGGCATTGTCAACGAGAACCTGGTCG 627818
Query 61259 AACGTTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATT 61317
| |||||| |||| | ||||||| ||| | ||||| || || |||||||||||||||||
Sbjct 627819 AGCGTTTCAGCGCCG-AGGTGCAGGTGCCTGAGGCCCGCTGCTTCTACGGCTTCCAGATC 627877
Query 61318 GCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAG 61377
|||||||| ||||||| |||| ||| | ||||| || || ||||||| ||||
Sbjct 627878 ATGATGGAGAACATCCACTCCGAGACCTACTCGCTGCTCATTGACACCTACATCAAGGAG 627937
Query 61378 CGGGCGGAACGTGAACGAT--TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCG-- 61433
| || | | | || | | ||||| ||||| || || || || | | | ||
Sbjct 627938 CCCTCGCA--GCGCTCGTTCCTCTTCAACGCCATTGACACCATCCC--CTG-CATCCGCA 627992
Query 61434 -GAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAA--CGGCTACATTTGGTGAACG 61490
||| || || |||||| || ||||| |||| |||| | | | | || | ||
Sbjct 627993 AGAAGGCCGACTGGGCCATCCGCTGGAT--CCAGGACAAGGAGTCGTCCTACGGCCAGCG 628050
Query 61491 ATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTT 61550
|| | || ||||| | |||||||| | || ||||| || | || | | |||||
Sbjct 628051 CCTGGTTGCCTTTGCCGCCGTCGAGGGCATCTTCTTCAGCGGTGCCTTCTCGTCGATCTT 628110
Query 61551 TTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACG 61610
||| | ||||| || || | |||||||| ||||||||| ||| ||| |||| || ||
Sbjct 628111 CTGGGTCAAGAAGCGCGGCATGATGCCCGGCCTGACCTTCTCCAACGAGCTGATCTCGCG 628170
Query 61611 CGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCG 61670
|||||||| |||| || || || |||| ||| | | || | | ||
Sbjct 628171 TGACGAGGGTCTGCACACCGACTTCGCCTGCCTGCTCTTC---TCCCACCTCAAGCACCG 628227
Query 61671 TCCGTCGGAGGAGCGTGTGGGTGAGATTGTTC-GTGAGGCGGTAACTATCGAACAGGAAT 61729
|| |||| ||| |||| | || || || || | ||||| ||||| |
Sbjct 628228 CCCCAGCAAGGA-CGTCATCCAGAGAATCATCACCGATGCCGTGGCCATCGAGCAGGAGT 628286
Query 61730 TTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGT 61789
| | || || ||| ||||| | | || | |||||||| || ||| |||||
Sbjct 628287 TCATCACCGAGGCTCTGCCCTGCGCCCTGCTGGGCATGAACGCCACCCTGATGAAGCAGT 628346
Query 61790 ATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATA 61849
| || || || || |||||||| ||| |||||| | | || | || | | || ||
Sbjct 628347 ACATCGAGTTCGTCGCCGACCGCCTGCTGGTCGCTCTCGGCAACGAGAAGGTGTACAAGG 628406
Query 61850 CGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCG 61909
| | ||||| ||||| |||||||| | || ||||||| |||||||| || || ||||
Sbjct 628407 CCACCAACCCCTTTGACTTCATGGAGAACATCTCGCTGGGCGGCAAGACCAACTTCTTCG 628466
Query 61910 AGAAACGTGTAGGCGACTATCA 61931
|||| ||||| |||||||| ||
Sbjct 628467 AGAAGCGTGTTGGCGACTACCA 628488
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567355567120
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