Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11]
133 sequences; 35,489,142 total letters
Query= NC_027867.1
Length=651523
Score E
Sequences producing significant alignments: (Bits) Value
seq46 123 1e-22
>seq46
Length=1302616
Score = 123 bits (136), Expect = 1e-22
Identities = 353/530 (67%), Gaps = 31/530 (6%)
Strand=Plus/Plus
Query 448640 GCGCCGTAGGACTTGAAGGAGACGCGCTCCATGTCGCCCAATCGGAGCCCGCCGTGTCGC 448699
|||||||||| | | || |||||||||| ||||||| || || ||||| | |||
Sbjct 179842 GCGCCGTAGGCGATCAGACAGTCGCGCTCCATCTCGCCCAGCCGCAGGCCGCCCTCGCGC 179901
Query 448700 AACTTGCCCTCGGTGGGCTGCCGCGTGAGGAGCGAGTACGGTCCCCTCTGCCGCGTGTGC 448759
|| |||||| || ||||||||||| ||| || | ||| ||| || ||||| ||||
Sbjct 179902 GACCGGCCCTCCGTCGGCTGCCGCGTCAGGCTCGCGCGCGGGCCCGTCGACCGCGAGTGC 179961
Query 448760 ATCTTCTCCGAGGCCAGTTGCTTGAGGCTCTGGAAGAAGAAGGGCGCGTAGAACATG--C 448817
||||| ||| ||| ||||| || | |||| || ||| ||| ||| | | ||| |
Sbjct 179962 ATCTTGTCCTGCACCATGTGCTTCAGCCGCTGGTAGTAGATCGGCCCGTTGTAGATGTAC 180021
Query 448818 GGCACGGCATCATCTCGCCCGTCTGGCCGTCCGTAAAGATCGTC-TTGCCCTC------- 448869
| | | || | ||||||||| || ||| ||| | ||| ||||||||
Sbjct 180022 GCCTC--CAGCGGCTCGCCCGTGATCCCCGACGTGAAG-TAGTCCTTGCCCTCCCAAGAG 180078
Query 448870 -----GGGCTCGATCATGCCCCTCTCCTCCATGTAGTCCATGAGCTCGGCCACGGAGAGG 448924
| || | | || || || | || |||| | || | | | | | |||| |
Sbjct 180079 AATCCGTGCGCCACCA-GCACC-CGCC-CCATCTCCTCGACCGGGTGCGAC-CGGAACGC 180134
Query 448925 TCCGAAAAGGCCGTGCCGTCCT-GCGGCAAGCC-GCTCTCACAGCCCGTGATGGCCTGGA 448982
|| || ||||| ||||| ||| | || || | || || || || | |
Sbjct 180135 GTCGCCAAAGCCGTA--GTCCTTGCGCCCGTCCAGCACCGACG--CCTTGCCGGTC---A 180187
Query 448983 GGGCCTCGAGCAACATGGCGTAGGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGA 449042
|| ||||| || | || || ||||||||||||||| || | ||||||||||||||||
Sbjct 180188 GGCACTCGATCAGCTTGCCGACCGTCATGCGCGACGGGAAGCCGTGCGGGTTCATGATGA 180247
Query 449043 TGTCGGGCGTCTCGCCGGCCGCGTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGT 449102
|||||||| ||| | || ||| |||| |||||| ||| ||| | | ||||
Sbjct 180248 TGTCGGGCACAATGCCCGAGTCGGAGAACGGCAGGTCCTCCTGGTCGACAATGATGCCGA 180307
Query 449103 TGACGCCCTTCTGGCCGTGGCGGCTGCAGAACTTGTCCCCCTGCTCGGGC 449152
||||||||||| |||||||| |||||||||| ||| |||| |||
Sbjct 180308 CCACGCCCTTCTGCCCGTGGCGCGACGAGAACTTGTCGCCCAGCTCCGGC 180357
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2084735560827134
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |