Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11] 133 sequences; 35,489,142 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq46 123 1e-22 >seq46 Length=1302616 Score = 123 bits (136), Expect = 1e-22 Identities = 353/530 (67%), Gaps = 31/530 (6%) Strand=Plus/Plus Query 448640 GCGCCGTAGGACTTGAAGGAGACGCGCTCCATGTCGCCCAATCGGAGCCCGCCGTGTCGC 448699 |||||||||| | | || |||||||||| ||||||| || || ||||| | ||| Sbjct 179842 GCGCCGTAGGCGATCAGACAGTCGCGCTCCATCTCGCCCAGCCGCAGGCCGCCCTCGCGC 179901 Query 448700 AACTTGCCCTCGGTGGGCTGCCGCGTGAGGAGCGAGTACGGTCCCCTCTGCCGCGTGTGC 448759 || |||||| || ||||||||||| ||| || | ||| ||| || ||||| |||| Sbjct 179902 GACCGGCCCTCCGTCGGCTGCCGCGTCAGGCTCGCGCGCGGGCCCGTCGACCGCGAGTGC 179961 Query 448760 ATCTTCTCCGAGGCCAGTTGCTTGAGGCTCTGGAAGAAGAAGGGCGCGTAGAACATG--C 448817 ||||| ||| ||| ||||| || | |||| || ||| ||| ||| | | ||| | Sbjct 179962 ATCTTGTCCTGCACCATGTGCTTCAGCCGCTGGTAGTAGATCGGCCCGTTGTAGATGTAC 180021 Query 448818 GGCACGGCATCATCTCGCCCGTCTGGCCGTCCGTAAAGATCGTC-TTGCCCTC------- 448869 | | | || | ||||||||| || ||| ||| | ||| |||||||| Sbjct 180022 GCCTC--CAGCGGCTCGCCCGTGATCCCCGACGTGAAG-TAGTCCTTGCCCTCCCAAGAG 180078 Query 448870 -----GGGCTCGATCATGCCCCTCTCCTCCATGTAGTCCATGAGCTCGGCCACGGAGAGG 448924 | || | | || || || | || |||| | || | | | | | |||| | Sbjct 180079 AATCCGTGCGCCACCA-GCACC-CGCC-CCATCTCCTCGACCGGGTGCGAC-CGGAACGC 180134 Query 448925 TCCGAAAAGGCCGTGCCGTCCT-GCGGCAAGCC-GCTCTCACAGCCCGTGATGGCCTGGA 448982 || || ||||| ||||| ||| | || || | || || || || | | Sbjct 180135 GTCGCCAAAGCCGTA--GTCCTTGCGCCCGTCCAGCACCGACG--CCTTGCCGGTC---A 180187 Query 448983 GGGCCTCGAGCAACATGGCGTAGGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGA 449042 || ||||| || | || || ||||||||||||||| || | |||||||||||||||| Sbjct 180188 GGCACTCGATCAGCTTGCCGACCGTCATGCGCGACGGGAAGCCGTGCGGGTTCATGATGA 180247 Query 449043 TGTCGGGCGTCTCGCCGGCCGCGTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGT 449102 |||||||| ||| | || ||| |||| |||||| ||| ||| | | |||| Sbjct 180248 TGTCGGGCACAATGCCCGAGTCGGAGAACGGCAGGTCCTCCTGGTCGACAATGATGCCGA 180307 Query 449103 TGACGCCCTTCTGGCCGTGGCGGCTGCAGAACTTGTCCCCCTGCTCGGGC 449152 ||||||||||| |||||||| |||||||||| ||| |||| ||| Sbjct 180308 CCACGCCCTTCTGCCCGTGGCGCGACGAGAACTTGTCGCCCAGCTCCGGC 180357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084735560827134