Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq52 266 3e-66 seq53 257 1e-63 >seq52 Length=173047 Score = 266 bits (294), Expect = 3e-66 Identities = 626/933 (67%), Gaps = 14/933 (2%) Strand=Plus/Minus Query 66014 GATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCAC 66073 || || || ||||||||||| | |||||||||||| || ||||||||||| || |||||| Sbjct 72372 GAAGCCAGATTGCAGACAGCAACCTCGTCAGGAGCAGTGTACTCGACAATCTCAGTGCAC 72313 Query 66074 AGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCC 66133 | || | | |||||||| | |||| || || ||| | ||||| |||||| Sbjct 72312 AAGTTCGAGGACTTGATGGTGCCAAGGTTCTTCTGGTTGGACTTTCTGTTGCAAGCATCC 72253 Query 66134 TTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGA 66193 ||||| | |||| |||| |||| ||||| ||| | || | ||| || | ||| || Sbjct 72252 TTGTAAAGCATGAACGGGTTGCCCGTCTCTGTTTGTGCTTCCAAGATAGCATACCACAGC 72193 Query 66194 GCGCGTGCCTTCACCGTACGTACCGCCCT--ACCTTTGCGTTCGTAATGTTCGTAGAGGT 66251 ||||||||| || || || ||| ||||| | ||||| | ||| | || Sbjct 72192 TTCTGTGCCTTCATAGTTTGT--CGACCTCGACCTTCCCTCTCGTATTTCTCGAAAAGTG 72135 Query 66252 GTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCG 66311 |||||| || || | || || |||| || || | || || | || | Sbjct 72134 CTTCGAACTCGTCGCCATAGCAGTCTGATAGACCAGGCGCCTCATTCGGGCAGAAAAGAG 72075 Query 66312 ACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGA 66371 ||| || | || || || || ||| || | ||| || ||||| || || |||| Sbjct 72074 TCCAGTCTTGGTTCTTCTCCACTCGCTTCATGAACAAATCGGGGATCCACAGAGCATAGA 72015 Query 66372 AGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAA 66431 | | ||| || |||| |||||| | |||||||| || || | || | |||||||| Sbjct 72014 ACAAATCACGAGCTCTAACCTCCTCCTTTCCGTGATTCTTTCGGAGGTTCATGAACTCAA 71955 Query 66432 AGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCAC 66491 | | ||||||||||| || || || ||||||||||| | ||| | ||| |||| Sbjct 71954 ATACATCGGCATGCCAAGGCTCAAGATAGATGGCGAAGGCGCCAGGTCTCTTGTTACCAC 71895 Query 66492 CTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAG 66551 |||| ||||| ||||| ||| |||| ||||| | | ||| |||||||| ||||| | Sbjct 71894 CTTGATCGACATAGCGGGCGGTGTTGTCAAAGACCCTAAGCATGGGTACGAGACCGTTGG 71835 Query 66552 ATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGAC 66611 || | || || |||||| | ||| || || || || || | |||||||||||||| Sbjct 71834 ATGTACCGTTAGTGCCGGCAATGTATGAGCCGGTAGCTCGGATTTTGTGAACATTCAGAC 71775 Query 66612 CAATACCACCGGCCGTCTTCGAGATGGCAGCACAA-TC-GGCCACTGTCCGGAATATGCC 66669 |||| ||||| || | || ||||| ||||||| || | | |||| | | || || Sbjct 71774 CAATGCCACCAGCATTTTTTGAGATCATAGCACAAGTCTTGAGAGTGTC--GTAGATACC 71717 Query 66670 GTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGT 66729 || || ||||| |||| ||| | |||| |||| || | ||| | || ||||| Sbjct 71716 CTCTATTGAGTCTTCCTTCATGTCGATGAGGAAGCAAGATGACATTTGTGCTTGTGGTGT 71657 Query 66730 GGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTA 66789 | | || ||| || ||||| | || || ||||| | | |||||| ||||| Sbjct 71656 GCCTGCGTTGAACAGAGTGGGCGAGGCATGTGTAAACATCTTTTGGGACATGAGGTTGTA 71597 Query 66790 CGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCAGGA 66848 ||||||||| | ||||||| || || ||||| || | | ||| ||||| || | Sbjct 71596 GGTCTCGATGGCCTTTTCAATGTCGTCTCCGTGAATGCCTACAGAGACA-CGCATAAGCA 71538 Query 66849 GGTATTGAGGCCGTTCGACCAG-CCGATCCTTGATA-TGCATTAAGTAGGAGCGTTCCAG 66906 || || |||| || |||| | ||| | ||| | || | ||| || | |||| Sbjct 71537 TGTGCTGGGGCC--TCTCCCAGACTTTTCCGTCATATTTCAGGAGGTATGATCTCTCCAA 71480 Query 66907 GGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939 |||||||| ||||||||| ||| ||||| || Sbjct 71479 GGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTC 71447 Score = 127 bits (140), Expect = 2e-24 Identities = 316/471 (67%), Gaps = 14/471 (3%) Strand=Plus/Minus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 ||||| |||||||| || | | || ||| | || | || |||||||| || ||| Sbjct 73290 TCGACTGTGAACTGAATTGGTGCGGATGCGGCCATCGTTCGGAGGTAGTACATACCCGTC 73231 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGC--ATAATTCGGCT 65195 ||||| || ||| || ||| ||||| || | |||| |||| || || |||| Sbjct 73230 TTGAGACCCATCTTCCAGCCAGCGAAGTGCATGGACG-TAATCTTGCCCATGGTT-GGCT 73173 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255 | || ||| || || | ||||| ||||| ||| || |||||| || || |||| Sbjct 73172 CTTTCAAATGGATGTTGAGAGACTGCGATTGATCAATGAAAGCACCACGGTCGGCGGCCA 73113 Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACC-TCA 65314 | | ||||| ||| || |||||||||||||||||||| ||| | | || ||| Sbjct 73112 TTTGGATGATCGTTCGTTGTGAGATCTCCCAGACGGTCTTGTAGAGG-GCCTTAATATCA 73054 Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATC 65374 ||| || | | | || |||| || || | | || || || | || ||| Sbjct 73053 GCTGGGATGTTCGGGACGTTTTGGATGGAGCCTCCATCGGCGATGATTCTGTTCTTCATG 72994 Query 65375 GACTCTGACCACAAACCCAAATCGATAAGATGTT---GAA-CCAAGTGACGATTGATGAC 65430 |||||||| | ||| | ||| | ||| | | ||| ||||| | |||| ||| Sbjct 72993 TTGTCTGACCATAGACCAAGATCAACAAGGTCCTTGAGAAGCCAAGGG----TTGACGAC 72938 Query 65431 TTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGA 65490 |||||| ||||| | || || ||||| ||||||||||||||| || || ||| | Sbjct 72937 TTGGAATTCGCCAGCCAAGACTCGACGAGAGTAGATGTTGGACGTGTATGGCTCGAAGCA 72878 Query 65491 TTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGAC 65541 || ||||||| | ||| || | ||||||||||||||||| ||||| || Sbjct 72877 CTCGTTGTTGCCCAAAATCTGTGAGGTAGATGCAGTTGGCATAGGAGCAAC 72827 >seq53 Length=169705 Score = 257 bits (284), Expect = 1e-63 Identities = 576/849 (68%), Gaps = 32/849 (4%) Strand=Plus/Minus Query 61099 TACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATG 61158 ||||| | || ||||||| |||||||| | ||||||||||| ||||||||||| | Sbjct 76927 TACAAGAGAGCTCAAGCTTCGTTCTGGACTGCTGAGGAGGTCGACCTGTCCAAAGACCTC 76868 Query 61159 AATGACTGGGAGC----GTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGC 61214 | |||||| | | | | ||| || ||||| ||||||| || ||| | || Sbjct 76867 CACGACTGGCACAACAAGCTCAACGA-CGATGAACGTTATTTCATCTCCCACGTGCTCGC 76809 Query 61215 GTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGA 61274 ||||| || || || ||||| |||||||| ||||| | | || || ||| | || Sbjct 76808 CTTCTTCGCTGCCTCTGACGGCATCGTCAACGAGAACCTCCTCGAGCGCTTCTCTGGTGA 76749 Query 61275 GGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCA 61334 || ||||| | || || || || ||||| ||||||||||| |||||||| |||| Sbjct 76748 AGTCCAAGTTCCCGAAGCTCGATGCTTCTATGGCTTCCAGATCATGATGGAGAACATCCA 76689 Query 61335 CTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC--GGGCGGAACGTGAA 61392 ||| ||||||||||| | ||||| || || ||| | | ||||| || ||| | | Sbjct 76688 CTCCGAGATGTACAGCTTGCTCATTGACACATACGTGAAGGAGCAAAAGCAGAAGCAGTA 76629 Query 61393 CGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGC-CTT 61451 | ||||| | || ||||| || || || | | | ||| || || ||||| ||| Sbjct 76628 C--CTGTTCGACGCTATCGACACAATCCCATGTATCAGGAAGAAGGCCGAATGGGCTCTT 76571 Query 61452 CAATTGGATCACCAGTACAACG---GCTACATTTGGTGAACGATTGCTGGCATTTGCGGT 61508 | | |||||| ||| |||| | || ||||| | | | || | | || ||||| | Sbjct 76570 CGA-TGGATC-TCAG-ACAAGGAGAGC-ACATTCGCTCAGCGTCTCGTCGCCTTTGCTGC 76515 Query 61509 GGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGG 61568 ||||||||| | || ||| || ||||||||| | ||||| ||| | ||||| || || Sbjct 76514 CGTCGAGGGTATTTTCTTCTCCGGCTCGTTTGCCTCCATCTTCTGGCTCAAGAAGCGAGG 76455 Query 61569 ACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTG 61628 || ||||| ||||| |||||| ||| || | || || || |||||||||||||| Sbjct 76454 TCTCATGCCAGGTCTTACCTTCTCCAACGAACTCATCTCCCGAGACGAGGGCATGCACAC 76395 Query 61629 TGATTTTGC-TG--TTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCG 61685 ||| || || || | | || | | | | | | | | ||||| || |||| Sbjct 76394 TGACTTCGCATGCCTCCTTCTCTCCCACCTCAACC------ACCGTCCATCAAAGGA--- 76344 Query 61686 TGTGGGTGAGATTGT--TCGT-GAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGC 61742 ||| ||||| || || | ||||| || ||||| |||||||| || || || || Sbjct 76343 TGTCATTGAGAAAGTCATCATCGAGGCCGTCGGCATCGAGCAGGAATTCCTTACGGAAGC 76284 Query 61743 TTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGT 61802 | |||||| | || | |||||||| | || ||| ||||||||| || || || Sbjct 76283 CCTCCCCGTCGCTCTGTTGGGCATGAACCATACCCTCATGAAGCAGTATATCGAGTTCGT 76224 Query 61803 TGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATT 61862 |||||||| ||||||||| |||| | | ||| || | | |||||||| Sbjct 76223 CGCCGACCGACTGTTGGTCAGCATGGGCAATCCCAAGTACTACAAGGCTACCAACCCATT 76164 Query 61863 TGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGG 61922 || |||||||| | || || |||| |||||||| || || |||||||| || || || Sbjct 76163 CGACTTCATGGAGAACATCTCCCTGGCCGGCAAGACTAACTTCTTCGAGAAGCGCGTCGG 76104 Query 61923 CGACTATCA 61931 || || || Sbjct 76103 TGATTACCA 76095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397565528866400