Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10]
1,759 sequences; 43,620,960 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq1052 224 1e-56
seq1192 98.7 1e-18
>seq1052
Length=38482
Score = 224 bits (248), Expect = 1e-56
Identities = 190/229 (83%), Gaps = 5/229 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| || ||||||||| ||||||||||||||| |
Sbjct 30886 GTACAAAGGGCAGGGACGTAATCAACGCAAG-TTGATGACTTACGCTTACTAGGAATT-C 30829
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | ||| | ||||||
Sbjct 30828 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTAACAAGATT 30769
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||| | || | |||| || |||| || | |||||||| ||||||||||
Sbjct 30768 ACCCAAGTATCTCTACTAAGGAAGTA--CTCGCTGTCTCTGTCAGTGTAACGCGCGTGCG 30711
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
|||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 30710 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCATCCAACTTCC 30662
>seq1192
Length=82949
Score = 98.7 bits (108), Expect = 1e-18
Identities = 121/162 (75%), Gaps = 4/162 (2%)
Strand=Plus/Plus
Query 44 CGCTTACTAGGAATTTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA 103
|| |||||||||||| ||||||||| | | | |||||||| |||||||||| |||||
Sbjct 28523 CGTTTACTAGGAATT-CCTCGTTGACAAGTGATAGTTGCAATGCTCTATCCCCAGCACGA 28581
Query 104 TGAAATTTCA-AAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATC 162
| ||| | ||||||||| | || | |||| || |||| || | ||
Sbjct 28582 CAGAGTTTAACAAGATTACCAAAGTATCTCTACTAAGGAATTA--CTCGCTGTCTCTGTC 28639
Query 163 AGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACA 204
|||||| ||||| |||||||| ||||||||||||||||||||
Sbjct 28640 AGTGTAACGCGCATGCGGCCCGGAACATCTAAGGGCATCACA 28681
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751987185685
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |