Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10] 1,759 sequences; 43,620,960 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq1052 224 1e-56 seq1192 98.7 1e-18 >seq1052 Length=38482 Score = 224 bits (248), Expect = 1e-56 Identities = 190/229 (83%), Gaps = 5/229 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| || ||||||||| ||||||||||||||| | Sbjct 30886 GTACAAAGGGCAGGGACGTAATCAACGCAAG-TTGATGACTTACGCTTACTAGGAATT-C 30829 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | ||| | |||||| Sbjct 30828 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTAACAAGATT 30769 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| | || | |||| || |||| || | |||||||| |||||||||| Sbjct 30768 ACCCAAGTATCTCTACTAAGGAAGTA--CTCGCTGTCTCTGTCAGTGTAACGCGCGTGCG 30711 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct 30710 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCATCCAACTTCC 30662 >seq1192 Length=82949 Score = 98.7 bits (108), Expect = 1e-18 Identities = 121/162 (75%), Gaps = 4/162 (2%) Strand=Plus/Plus Query 44 CGCTTACTAGGAATTTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA 103 || |||||||||||| ||||||||| | | | |||||||| |||||||||| ||||| Sbjct 28523 CGTTTACTAGGAATT-CCTCGTTGACAAGTGATAGTTGCAATGCTCTATCCCCAGCACGA 28581 Query 104 TGAAATTTCA-AAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATC 162 | ||| | ||||||||| | || | |||| || |||| || | || Sbjct 28582 CAGAGTTTAACAAGATTACCAAAGTATCTCTACTAAGGAATTA--CTCGCTGTCTCTGTC 28639 Query 163 AGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACA 204 |||||| ||||| |||||||| |||||||||||||||||||| Sbjct 28640 AGTGTAACGCGCATGCGGCCCGGAACATCTAAGGGCATCACA 28681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751987185685