Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10]
1,759 sequences; 43,620,960 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq1052 181 6e-44
seq321 165 5e-39
>seq1052
Length=38482
Score = 181 bits (200), Expect = 6e-44
Identities = 111/117 (95%), Gaps = 1/117 (1%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||| ||
Sbjct 30360 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAACGAGTCAAAAA-ATAACATCGTCC 30302
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 30301 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 30245
>seq321
Length=63023
Score = 165 bits (182), Expect = 5e-39
Identities = 103/110 (94%), Gaps = 1/110 (1%)
Strand=Plus/Minus
Query 8 AAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGATCCCT 67
|| ||||||| ||||||||||||||||| |||||||||| ||||||||| |||||||||
Sbjct 48065 AAAACTTTGAKTTCTCGTAAGGTGCCGAACGAGTCAAAAA-ATAACATCGTCCGATCCCT 48007
Query 68 AGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 48006 AGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 47957
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278395409010
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |