Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10] 1,759 sequences; 43,620,960 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq1052 181 6e-44 seq321 165 5e-39 >seq1052 Length=38482 Score = 181 bits (200), Expect = 6e-44 Identities = 111/117 (95%), Gaps = 1/117 (1%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||| || Sbjct 30360 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAACGAGTCAAAAA-ATAACATCGTCC 30302 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 30301 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 30245 >seq321 Length=63023 Score = 165 bits (182), Expect = 5e-39 Identities = 103/110 (94%), Gaps = 1/110 (1%) Strand=Plus/Minus Query 8 AAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGATCCCT 67 || ||||||| ||||||||||||||||| |||||||||| ||||||||| ||||||||| Sbjct 48065 AAAACTTTGAKTTCTCGTAAGGTGCCGAACGAGTCAAAAA-ATAACATCGTCCGATCCCT 48007 Query 68 AGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 48006 AGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 47957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278395409010