Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10]
1,759 sequences; 43,620,960 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq1052 473 2e-131
seq1217 464 1e-128
seq1289 152 9e-35
seq1444 138 2e-30
>seq1052
Length=38482
Score = 473 bits (524), Expect = 2e-131
Identities = 294/314 (94%), Gaps = 1/314 (0%)
Strand=Plus/Plus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
|||| ||||||||||||||| |||||||| || |||||||||||||||||| |||||
Sbjct 29931 TGGTTCGGCCGGGCCTTTCCCTCTGGGGAGCCCTATGCCCTTCACTGGGTGTAGTGGGGA 29990
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
|||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||
Sbjct 29991 ACCAGGACTTTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCTCGGATACAT 30050
Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 30051 TAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 30110
Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244
||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct 30111 AATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 30170
Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304
||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||
Sbjct 30171 ATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAG-GA 30229
Query 305 ACGAAAGTTAGGGG 318
||||||||||||||
Sbjct 30230 ACGAAAGTTAGGGG 30243
>seq1217
Length=30757
Score = 464 bits (514), Expect = 1e-128
Identities = 293/314 (93%), Gaps = 2/314 (1%)
Strand=Plus/Minus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
|||| ||||||||||||||| |||||||| || |||||||||||||||||| |||||
Sbjct 343 TGGTTCGGCCGGGCCTTTCCCTCTGGGGAGCCCTATGCCCTTCACTGGGTGTAGTGGGGA 284
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
|||||||||| ||| |||||||||||||||||||||||||||||| |||||| ||||||
Sbjct 283 ACCAGGACTTT-ACTGTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCTCGGATACAT 225
Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 224 TAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 165
Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244
||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct 164 AATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 105
Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304
||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||
Sbjct 104 ATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAG-GA 46
Query 305 ACGAAAGTTAGGGG 318
||||||||||||||
Sbjct 45 ACGAAAGTTAGGGG 32
>seq1289
Length=27655
Score = 152 bits (168), Expect = 9e-35
Identities = 206/287 (72%), Gaps = 0/287 (0%)
Strand=Plus/Minus
Query 12 GCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA 71
||||||||||||||||| || | || || | || ||| || | | | | || |
Sbjct 5460 GCCGGGCCTTTCCTTCTAGGAAGCCCTATACTTTTTACTAAGTATAGTAAGAAACTAGAA 5401
Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATG 131
|||||||| | ||||||||| ||| || ||||||||||| | || ||| ||||| ||
Sbjct 5400 CTTTTACTATAAAAAAATTAAAGTATTTAAAGCAGGCCTATACTTAGATATATTAGTATA 5341
Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATT 191
||||||| |||| || | |||||||||| || |||| |||||| || |||| |||
Sbjct 5340 AAATAATAAAATAAGATATATAGTTCTATTTTATTAGTTTTTAGGACTGCTATAATAATT 5281
Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251
|||||||||| | | | | |||| |||| | | | || ||||| || ||||||||
Sbjct 5280 AATAGGGATAATTAAAAGCATTAATATTTAATTATTAAAAGTAAAATTTTTAGATTTATT 5221
Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAAT 298
|| |||||||| | ||| || || ||| || |||| ||||||
Sbjct 5220 AAAAACTAACTATTATAAAAATATTTACTAAGAATATTTTTATTAAT 5174
>seq1444
Length=22337
Score = 138 bits (152), Expect = 2e-30
Identities = 177/243 (73%), Gaps = 1/243 (0%)
Strand=Plus/Plus
Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATG 131
|||||| | | ||||||||| | | || |||||| || | |||| |||| ||||| ||
Sbjct 2088 CTTTTATTATAAAAAAATTAAAATATTTAAAGCAAGCTTATGCTTAAATATATTAGTATA 2147
Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATT 191
|||||||||||||||||| |||| || |||||| |||| || || || ||||||||
Sbjct 2148 AAATAATAGAATAGGACGTATGGTTTTAGTTTGTTAGTTTTTAAAACTGCTATAATGATT 2207
Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251
|||| | ||||| | | | |||| |||| | | | | ||||| || ||||||||
Sbjct 2208 AATAAGAATAGTTAAAAGCATTAATATTTAATTATTAAAAATAAAATTTTTAGATTTATT 2267
Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311
|| |||||||||| ||| || | || || |||| |||||| || ||| ||||
Sbjct 2268 AAAAACTAACTACTATAAAAATATTTATTAAAAATATTTTTATTAATTAG-GAATAAAAG 2326
Query 312 TTA 314
|||
Sbjct 2327 TTA 2329
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915183901632
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |