Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10] 1,759 sequences; 43,620,960 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1052 473 2e-131 seq1217 464 1e-128 seq1289 152 9e-35 seq1444 138 2e-30 >seq1052 Length=38482 Score = 473 bits (524), Expect = 2e-131 Identities = 294/314 (94%), Gaps = 1/314 (0%) Strand=Plus/Plus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 |||| ||||||||||||||| |||||||| || |||||||||||||||||| ||||| Sbjct 29931 TGGTTCGGCCGGGCCTTTCCCTCTGGGGAGCCCTATGCCCTTCACTGGGTGTAGTGGGGA 29990 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 |||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||| Sbjct 29991 ACCAGGACTTTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCTCGGATACAT 30050 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 30051 TAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 30110 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct 30111 AATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 30170 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| || Sbjct 30171 ATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAG-GA 30229 Query 305 ACGAAAGTTAGGGG 318 |||||||||||||| Sbjct 30230 ACGAAAGTTAGGGG 30243 >seq1217 Length=30757 Score = 464 bits (514), Expect = 1e-128 Identities = 293/314 (93%), Gaps = 2/314 (1%) Strand=Plus/Minus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 |||| ||||||||||||||| |||||||| || |||||||||||||||||| ||||| Sbjct 343 TGGTTCGGCCGGGCCTTTCCCTCTGGGGAGCCCTATGCCCTTCACTGGGTGTAGTGGGGA 284 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 |||||||||| ||| |||||||||||||||||||||||||||||| |||||| |||||| Sbjct 283 ACCAGGACTTT-ACTGTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCTCGGATACAT 225 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 224 TAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 165 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct 164 AATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 105 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| || Sbjct 104 ATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAG-GA 46 Query 305 ACGAAAGTTAGGGG 318 |||||||||||||| Sbjct 45 ACGAAAGTTAGGGG 32 >seq1289 Length=27655 Score = 152 bits (168), Expect = 9e-35 Identities = 206/287 (72%), Gaps = 0/287 (0%) Strand=Plus/Minus Query 12 GCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA 71 ||||||||||||||||| || | || || | || ||| || | | | | || | Sbjct 5460 GCCGGGCCTTTCCTTCTAGGAAGCCCTATACTTTTTACTAAGTATAGTAAGAAACTAGAA 5401 Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATG 131 |||||||| | ||||||||| ||| || ||||||||||| | || ||| ||||| || Sbjct 5400 CTTTTACTATAAAAAAATTAAAGTATTTAAAGCAGGCCTATACTTAGATATATTAGTATA 5341 Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATT 191 ||||||| |||| || | |||||||||| || |||| |||||| || |||| ||| Sbjct 5340 AAATAATAAAATAAGATATATAGTTCTATTTTATTAGTTTTTAGGACTGCTATAATAATT 5281 Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251 |||||||||| | | | | |||| |||| | | | || ||||| || |||||||| Sbjct 5280 AATAGGGATAATTAAAAGCATTAATATTTAATTATTAAAAGTAAAATTTTTAGATTTATT 5221 Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAAT 298 || |||||||| | ||| || || ||| || |||| |||||| Sbjct 5220 AAAAACTAACTATTATAAAAATATTTACTAAGAATATTTTTATTAAT 5174 >seq1444 Length=22337 Score = 138 bits (152), Expect = 2e-30 Identities = 177/243 (73%), Gaps = 1/243 (0%) Strand=Plus/Plus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATG 131 |||||| | | ||||||||| | | || |||||| || | |||| |||| ||||| || Sbjct 2088 CTTTTATTATAAAAAAATTAAAATATTTAAAGCAAGCTTATGCTTAAATATATTAGTATA 2147 Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATT 191 |||||||||||||||||| |||| || |||||| |||| || || || |||||||| Sbjct 2148 AAATAATAGAATAGGACGTATGGTTTTAGTTTGTTAGTTTTTAAAACTGCTATAATGATT 2207 Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251 |||| | ||||| | | | |||| |||| | | | | ||||| || |||||||| Sbjct 2208 AATAAGAATAGTTAAAAGCATTAATATTTAATTATTAAAAATAAAATTTTTAGATTTATT 2267 Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311 || |||||||||| ||| || | || || |||| |||||| || ||| |||| Sbjct 2268 AAAAACTAACTACTATAAAAATATTTATTAAAAATATTTTTATTAATTAG-GAATAAAAG 2326 Query 312 TTA 314 ||| Sbjct 2327 TTA 2329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915183901632