Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10]
1,759 sequences; 43,620,960 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq1052 724 0.0
seq800 426 7e-117
seq1289 109 2e-21
seq1696 87.8 7e-15
>seq1052
Length=38482
Score = 724 bits (802), Expect = 0.0
Identities = 570/670 (85%), Gaps = 17/670 (3%)
Strand=Plus/Plus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct 31854 TGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTAAAT 31913
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 31914 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 31973
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
|||||||||||||| |||||| |||||| |||||||||||||||||||||||||||| ||
Sbjct 31974 TGAAAAGCACTTTGAAAAGAGGGTTAAATAGCACGTGAAATTGTTGAAAGGGAAGCGTTT 32033
Query 203 GCAACCAGAC--TTGCCCGCAGTTGCTCAACCGGCCC-CTCGGCCGGTGCACTCTTCTGC 259
|| ||||||| || || | | | ||| |||| ||| |||||||||| || |
Sbjct 32034 GCGACCAGACCTTTTCCTGGCG--GATCATCCGGTGTTCTCA-CCGGTGCACT--TCGCC 32088
Query 260 -GGTC-AGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTT 317
|||| ||||||||||| | | | | ||||||| ||| |||| || || ||||
Sbjct 32089 AGGTCGAGGCCAGCATCGGTTTTCGTAGGGGGATAAAAGCCTGAGGAACGTAGCTCCCTC 32148
Query 318 CGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCC 375
||| |||||||||||| | ||| | | |||| |||| |||||| ||
Sbjct 32149 --GGGAGTGTTATAGCCCCTCGCATAATACCTTTA-CGGGGACCGAGGACCGCGCCTTCG 32205
Query 376 GGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTC 435
||| ||||||||||| |||||||||| | || ||||||||| ||||||||||||||||||
Sbjct 32206 GGCAAGGATGCTGGCATAATGGTTGTCAACGACCCGTCTTGAAACACGGACCAAGGAGTC 32265
Query 436 TAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGT 495
||||| | ||||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct 32266 GAACATTTGTGCGAGTGTTTGGGTGTTAAACCCTCACGCGTAATGAAAGTGAACGGAGGT 32325
Query 496 GGGAACCCGTGA--GGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTA 553
| || ||| | ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 32326 GAGAGCCCCTTGCGGGGTGCATCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTA 32385
Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613
|||||||| ||||| ||||||||||||||||||||||||| || ||||||||||||||||
Sbjct 32386 AGAGCATAACTGTTCGGACCCGAAAGATGGTGAACTATGCGTGGATAGGGTGAAGCCAGA 32445
Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673
|||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |
Sbjct 32446 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATCTGCGC 32505
Query 674 ATAGGGGCGA 683
|| |||||||
Sbjct 32506 ATGGGGGCGA 32515
>seq800
Length=2272
Score = 426 bits (472), Expect = 7e-117
Identities = 368/447 (82%), Gaps = 13/447 (3%)
Strand=Plus/Plus
Query 243 CCGGTGCACTCTTCTGC-GGTC-AGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCC 300
|||||||||| || | |||| ||||||||||| | | | | ||||||| |||
Sbjct 16 CCGGTGCACT--TCGCCAGGTCGAGGCCAGCATCGGTTTTCGTAGGGGGATAAAAGCCTG 73
Query 301 GGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGAC 360
|||| || || |||| ||| |||||||||||| | ||| | | ||||
Sbjct 74 AGGAACGTAGCTCCCTC--GGGAGTGTTATAGCCCCTCGCATAATACCTTTA-CGGGGAC 130
Query 361 TGAGGTCCGCGC--TCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGA 418
|||| |||||| || ||| ||||||||||| |||||||||| | || ||||||||| |
Sbjct 131 CGAGGACCGCGCCTTCGGGCAAGGATGCTGGCATAATGGTTGTCAACGACCCGTCTTGAA 190
Query 419 ACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAA 478
||||||||||||||||| ||||| | ||||||||||||||||| |||||| |||||||
Sbjct 191 ACACGGACCAAGGAGTCGAACATTTGTGCGAGTGTTTGGGTGTTAAACCCTCACGCGTAA 250
Query 479 TGAAAGTGAACGGAGGTGGGAAC--CCGTGAGGGTGCACCATCGACCGATCCTGATGTCT 536
|||||||||||||||||| || | | ||| || | |||||||||||||||||||||
Sbjct 251 TGAAAGTGAACGGAGGTGAGAGCTGCGGTGCGGNG--ATCATCGACCGATCCTGATGTCT 308
Query 537 TCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTG 596
||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||
Sbjct 309 TCGGATGGATTTGAGTAAGAGCATAACTGTTCGGACCCGAAAGATGGTGAACTATGCGTG 368
Query 597 AATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATC 656
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 369 GATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATC 428
Query 657 GATCGTCAAATTTGGGTATAGGGGCGA 683
||||||||||| || | || |||||||
Sbjct 429 GATCGTCAAATCTGCGCATGGGGGCGA 455
>seq1289
Length=27655
Score = 109 bits (120), Expect = 2e-21
Identities = 123/165 (75%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 517 ATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGA 576
||| ||||||| | || ||||||||| ||||||||||||| |||| ||||| |||| |
Sbjct 3043 ATCAACCGATCTTAATATCTTCGGATAGATTTGAGTAAGAACATAACTGTTCGGACTTAA 2984
Query 577 AAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCA 636
||||| | |||||| | |||| || || | | | |||||||||| | ||| |||
Sbjct 2983 AAGATAATAAACTATATATAAATAAAGTAAAACTAAAAAAAACTCTGGTAAAAGCTTGCA 2924
Query 637 GCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681
|||||||| ||| |||||| || | |||| | ||||||||
Sbjct 2923 GCGGTTCTAACGTACAAATCAATTATTAAATCTATACATAGGGGC 2879
Score = 93.3 bits (102), Expect = 2e-16
Identities = 97/126 (77%), Gaps = 1/126 (1%)
Strand=Plus/Minus
Query 67 TAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAG 126
||||| |||||||||||| || |||||||||||||| || | | |||||||| | ||
Sbjct 3495 TAAATAGGAGGTAAATTTTTTTTAAAGCTAAATATTAGCTAAAAACCGATAGTATATAAA 3436
Query 127 TAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCAC-GTGAAATTG 185
|| ||| || ||| || ||||| ||||| ||| | |||||| ||||| || |||||
Sbjct 3435 TAAAGTAATTAAAAAATAAAAAGTACTTTAAAAAAAAGGTTAAATAGCACAGTAAAATTA 3376
Query 186 TTGAAA 191
|| |||
Sbjct 3375 TTAAAA 3370
>seq1696
Length=16007
Score = 87.8 bits (96), Expect = 7e-15
Identities = 57/63 (90%), Gaps = 0/63 (0%)
Strand=Plus/Plus
Query 492 AGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAG 551
||||| || ||| || ||||||| |||| |||||||||||||||||||||||||||||||
Sbjct 11899 AGGTGAGAGCCCTTGCGGGTGCATCATCCACCGATCCTGATGTCTTCGGATGGATTTGAG 11958
Query 552 TAA 554
|||
Sbjct 11959 TAA 11961
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079962269450
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |