Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10]
1,759 sequences; 43,620,960 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq1052 322 8e-86
seq1192 80.6 4e-13
seq1289 73.4 6e-11
>seq1052
Length=38482
Score = 322 bits (356), Expect = 8e-86
Identities = 229/259 (88%), Gaps = 3/259 (1%)
Strand=Plus/Minus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| || ||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 30744 TACTCGCTGTCTCTGTCAGTGTAACGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 30685
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
|||||||||||| || |||||||| ||| |||| ||||||||||||||||||||||
Sbjct 30684 ACCTGTTATTGCATCCAACTTCCACCCGCTT-AAGCGGATAGTCCCTCTAAGAAGCCAGC 30626
Query 121 CACCAACCATAGTCGATG-GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179
| ||| || | || |||||||||||||||| || |||||||||||||||| ||||
Sbjct 30625 GTACTGCCAAAG-CAATACGGGCTATTTAGCAGGTAAATGTCTCGTTCGTTATCGCAATT 30567
Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239
|| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 30566 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 30507
Query 240 AAAGAGCTATCAATCTGTC 258
|||||||| ||||||||||
Sbjct 30506 AAAGAGCTCTCAATCTGTC 30488
>seq1192
Length=82949
Score = 80.6 bits (88), Expect = 4e-13
Identities = 53/59 (90%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACA 59
|||||| || ||| ||||||||| ||||| |||||||| ||||||||||||||||||||
Sbjct 28623 TACTCGCTGTCTCTGTCAGTGTAACGCGCATGCGGCCCGGAACATCTAAGGGCATCACA 28681
>seq1289
Length=27655
Score = 73.4 bits (80), Expect = 6e-11
Identities = 156/229 (68%), Gaps = 3/229 (1%)
Strand=Plus/Plus
Query 28 GCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTG 87
||||||||||||||| || ||| | || | |||| ||||||| || || ||| |||
Sbjct 4681 GCGTGCGGCCCAGAATATTTAAAAGTATTATAGACTTGTTATTATATCTAATTTCTATTT 4740
Query 88 GCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCGATG-GGGCTATT 146
| ||| |||||| | ||| |||| ||| | | | || | || ||||||||
Sbjct 4741 ATTT-AAGTAGATAGTCTTTTTAAAAAGCTAGCGTACTATTAAAG-CAATACGGGCTATT 4798
Query 147 TAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAA 206
||||| || || | | ||| ||||| |||||| | | |||| | | || ||||||
Sbjct 4799 TAGCAAGTAAATATTTTGTTTGTTATTATAATTAAGTAAATAAATTATTTTACTAACTAA 4858
Query 207 GAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCT 255
|| || ||| || | ||| ||| ||| || ||| || | | |||||
Sbjct 4859 AAATAGCTATGTACTATTACCTATAAAATTAAAAAAAAGTTTTTAATCT 4907
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796786422279
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |