Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10] 1,759 sequences; 43,620,960 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq1052 497 2e-138 seq1289 208 1e-51 >seq1052 Length=38482 Score = 497 bits (550), Expect = 2e-138 Identities = 288/295 (98%), Gaps = 1/295 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| |||||||||||| || || |||||||||||||||||||||||||||||||| Sbjct 34677 TACTAAGCTGAATTACCATTGCGGTGA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCA 34619 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 34618 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 34559 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 34558 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAT 34499 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 34498 GAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 34439 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 34438 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 34384 >seq1289 Length=27655 Score = 208 bits (230), Expect = 1e-51 Identities = 222/292 (76%), Gaps = 1/292 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| |||||| ||| | | ||| || | || | |||||||||||||| | | Sbjct 711 TACTAAGCTAAATTACTATTATAGTAA-GGTTATTAATAAGATAAAACTAACCTGTTTTA 769 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 | || |||||||| |||| | ||| ||||||| ||| ||||||| |||||||| | | Sbjct 770 TAACAATCTAAACCTAGCTTATGTTTTTTATTAGTAGGTAAACAATCTAACGCTTATCAA 829 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||||||||||||| ||| |||||| | || || |||||||||| ||||| ||||| Sbjct 830 ATTCTGCTTCGGTATAATAAAAAGAGCTAATATTAAAAGATCAAAAAGTAACGTTGCTAT 889 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 |||| || ||| | |||| |||||| | | ||||||||| | | | | |||| | Sbjct 890 AAACGTTTAGCTATTATAAGCTAGTTATTTTTATAGTAACTTTTTTAGTATTTTTAGCTT 949 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292 |||||| | | ||||||||||| |||||| | ||||| |||||||||||| Sbjct 950 TAAATTTTAAAGAACTAAAGGATCAATAGGCTATACTTTTATGGTTTGTATT 1001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854384971104