Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10]
1,759 sequences; 43,620,960 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq1052 497 2e-138
seq1289 208 1e-51
>seq1052
Length=38482
Score = 497 bits (550), Expect = 2e-138
Identities = 288/295 (98%), Gaps = 1/295 (0%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||| |||||||||||| || || ||||||||||||||||||||||||||||||||
Sbjct 34677 TACTAAGCTGAATTACCATTGCGGTGA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCA 34619
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 34618 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 34559
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 34558 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAT 34499
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 34498 GAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 34439
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 34438 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 34384
>seq1289
Length=27655
Score = 208 bits (230), Expect = 1e-51
Identities = 222/292 (76%), Gaps = 1/292 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||| |||||| ||| | | ||| || | || | |||||||||||||| | |
Sbjct 711 TACTAAGCTAAATTACTATTATAGTAA-GGTTATTAATAAGATAAAACTAACCTGTTTTA 769
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
| || |||||||| |||| | ||| ||||||| ||| ||||||| |||||||| | |
Sbjct 770 TAACAATCTAAACCTAGCTTATGTTTTTTATTAGTAGGTAAACAATCTAACGCTTATCAA 829
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||||||||||||||| ||| |||||| | || || |||||||||| ||||| |||||
Sbjct 830 ATTCTGCTTCGGTATAATAAAAAGAGCTAATATTAAAAGATCAAAAAGTAACGTTGCTAT 889
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
|||| || ||| | |||| |||||| | | ||||||||| | | | | |||| |
Sbjct 890 AAACGTTTAGCTATTATAAGCTAGTTATTTTTATAGTAACTTTTTTAGTATTTTTAGCTT 949
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292
|||||| | | ||||||||||| |||||| | ||||| ||||||||||||
Sbjct 950 TAAATTTTAAAGAACTAAAGGATCAATAGGCTATACTTTTATGGTTTGTATT 1001
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854384971104
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |