Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10] 1,759 sequences; 43,620,960 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq1052 181 1e-43 seq1217 165 1e-38 >seq1052 Length=38482 Score = 181 bits (200), Expect = 1e-43 Identities = 159/193 (82%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | ||||||||||||||||||||||||||||||||| || Sbjct 30101 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATCCG 30042 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || || |||||||||||||||||||||||| ||| ||||||||||||||||| | | Sbjct 30041 AGCATAGGCCTGCTTTGAACACTCTAATTTTTTCACAGTAAAAGTCCTGGTTCCCCACTA 29982 Query 126 CA-CCAATGAA-GGCATACGGGCTCACCA-AGAGGTAGGGCTGGGTAATGCAGTACTCGC 182 || ||| |||| |||||| |||||| ||| || | ||| | || | |||| | ||| Sbjct 29981 CACCCAGTGAAGGGCATA-GGGCTCCCCAGAGGGAAAGGCCCGGCCGAACCAGTGCACGC 29923 Query 183 CGTGAGGCGGACC 195 |||||||||||| Sbjct 29922 GGTGAGGCGGACC 29910 >seq1217 Length=30757 Score = 165 bits (182), Expect = 1e-38 Identities = 157/193 (81%), Gaps = 6/193 (3%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | ||||||||||||||||||||||||||||||||| || Sbjct 174 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATCCG 233 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || || |||||||||||||||||||||||| ||| || |||||||||||||| | | Sbjct 234 AGCATAGGCCTGCTTTGAACACTCTAATTTTTTCACAGT-AAAGTCCTGGTTCCCCACTA 292 Query 126 CA-CCAATGAA-GGCATACGGGCTCACCA-AGAGGTAGGGCTGGGTAATGCAGTACTCGC 182 || ||| |||| |||||| |||||| ||| || | ||| | || | |||| | ||| Sbjct 293 CACCCAGTGAAGGGCATA-GGGCTCCCCAGAGGGAAAGGCCCGGCCGAACCAGTGCACGC 351 Query 183 CGTGAGGCGGACC 195 |||| ||||||| Sbjct 352 GGTGA-GCGGACC 363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595189857606