Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10]
1,759 sequences; 43,620,960 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq1052 279 5e-73
seq1217 269 3e-70
seq1289 98.7 1e-18
seq1444 96.9 4e-18
>seq1052
Length=38482
Score = 279 bits (308), Expect = 5e-73
Identities = 177/191 (93%), Gaps = 1/191 (1%)
Strand=Plus/Plus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
|||||||||||||||||| |||||||||||||| ||||||||||||||| |||||| |||
Sbjct 29988 GGAACCAGGACTTTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCTCGGATA 30047
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct 30048 CATTAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCG- 30106
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
|||||||||| |||| ||| ||||||||| ||||||||||||||||| |||||||||||
Sbjct 30107 CCGTAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 30166
Query 181 TTGGATTTATT 191
|||||||||||
Sbjct 30167 TTGGATTTATT 30177
>seq1217
Length=30757
Score = 269 bits (298), Expect = 3e-70
Identities = 176/191 (92%), Gaps = 2/191 (1%)
Strand=Plus/Minus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
|||||||||||||| ||| |||||||||||||| ||||||||||||||| |||||| |||
Sbjct 286 GGAACCAGGACTTT-ACTGTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCTCGGATA 228
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct 227 CATTAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCG- 169
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
|||||||||| |||| ||| ||||||||| ||||||||||||||||| |||||||||||
Sbjct 168 CCGTAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 109
Query 181 TTGGATTTATT 191
|||||||||||
Sbjct 108 TTGGATTTATT 98
>seq1289
Length=27655
Score = 98.7 bits (108), Expect = 1e-18
Identities = 136/189 (72%), Gaps = 1/189 (1%)
Strand=Plus/Minus
Query 3 AACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACA 62
||| || ||||||||| | ||||||||| || || ||||||||||| | || ||| |
Sbjct 5408 AACTAGAACTTTTACTATAAAAAAATTAAAGTATTTAAAGCAGGCCTATACTTAGATATA 5349
Query 63 TTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCC 122
||| || ||||||| |||| || | |||||||||| | |||| |||||| | |
Sbjct 5348 TTAGTATAAAATAATAAAATAAGATATATAGTTCTATTTTATTAGTTTTTAGGACTG-CT 5290
Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182
|||| || |||| ||||| | | | | |||| |||| | ||| || ||||| ||
Sbjct 5289 ATAATAATTAATAGGGATAATTAAAAGCATTAATATTTAATTATTAAAAGTAAAATTTTT 5230
Query 183 GGATTTATT 191
||||||||
Sbjct 5229 AGATTTATT 5221
>seq1444
Length=22337
Score = 96.9 bits (106), Expect = 4e-18
Identities = 136/190 (72%), Gaps = 1/190 (1%)
Strand=Plus/Plus
Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATAC 61
|||| || |||||| | | ||||||||| | || |||||| || | |||| ||||
Sbjct 2079 GAACTAGAGCTTTTATTATAAAAAAATTAAAATATTTAAAGCAAGCTTATGCTTAAATAT 2138
Query 62 ATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC 121
|||| || |||||||||||||||||| |||| || ||||| |||| || || | |
Sbjct 2139 ATTAGTATAAAATAATAGAATAGGACGTATGGTTTTAGTTTGTTAGTTTTTAAAACTG-C 2197
Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181
||||||| |||| | ||||| | | | |||| |||| | ||| | ||||| |
Sbjct 2198 TATAATGATTAATAAGAATAGTTAAAAGCATTAATATTTAATTATTAAAAATAAAATTTT 2257
Query 182 TGGATTTATT 191
| ||||||||
Sbjct 2258 TAGATTTATT 2267
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511991275360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |