Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10]
1,759 sequences; 43,620,960 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq1052 370 2e-100
seq1192 167 4e-39
seq1318 95.1 2e-17
>seq1052
Length=38482
Score = 370 bits (410), Expect = 2e-100
Identities = 268/309 (87%), Gaps = 2/309 (1%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| |||||| || ||||||||||||||| | |||||||| | ||| ||||||||||
Sbjct 30579 GAACGAGACATTTACCTGCTAAATAGCCCGTATTGCTTTGGCAGTACGCTGGCTTCTTAG 30638
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139
|||||||||| ||| |||| | |||||||| || ||||||||||||||||||||||||||
Sbjct 30639 AGGGACTATCCGCTTAAGCGGGTGGAAGTTGGATGCAATAACAGGTCTGTGATGCCCTTA 30698
Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199
|||||||||||||||||||||| ||||||||||||| || ||||| | | |||| | |
Sbjct 30699 GATGTTCTGGGCCGCACGCGCGTTACACTGACAGAGACAGCGAGTACTT--CCTTAGTAG 30756
Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259
| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 30757 AGATACTTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 30816
Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319
|||||||||||||||| ||||||||||| ||||||| | ||||||||||||||||||
Sbjct 30817 CTCTTCAACGAGGAATTCCTAGTAAGCGTAAGTCATCAACTTGCGTTGATTACGTCCCTG 30876
Query 320 CCCTTTGTA 328
|||||||||
Sbjct 30877 CCCTTTGTA 30885
>seq1192
Length=82949
Score = 167 bits (184), Expect = 4e-39
Identities = 134/161 (83%), Gaps = 2/161 (1%)
Strand=Plus/Minus
Query 127 TGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTC 186
|||||||||||||||||||| |||||||| ||||| ||||||||||||| || |||||
Sbjct 28681 TGTGATGCCCTTAGATGTTCCGGGCCGCATGCGCGTTACACTGACAGAGACAGCGAGTAA 28622
Query 187 ATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGC 246
|| ||| | | | | ||||||||||||||||||||||||||||||||||||||
Sbjct 28621 TTC--CTTAGTAGAGATACTTTGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGC 28564
Query 247 ATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCG 287
||||||| ||| || |||||||||||| |||||||| ||
Sbjct 28563 ATTGCAACTATCACTTGTCAACGAGGAATTCCTAGTAAACG 28523
>seq1318
Length=26620
Score = 95.1 bits (104), Expect = 2e-17
Identities = 146/204 (72%), Gaps = 12/204 (6%)
Strand=Plus/Minus
Query 126 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTT 185
|| |||||| ||| ||| | | ||||||||||| | || |||||||| |||||| |
Sbjct 11849 CTATGATGCATTTAAATGCTTTAGGCCGCACGCGTGTTATGTTGACAGAGACAACGAATA 11790
Query 186 CATCACCTTGGCCGGAAGGTCTGG-GTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGA 244
| || || || || ||||||||| |||||| | | ||||| ||||||||
Sbjct 11789 CTTCT--TT-------AGTACTTACGTAATCTTGCTAAACTTTATTGTGCTCGGGATAGA 11739
Query 245 GCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCG 304
||||||||||||||||| || | | | ||| |||||||| || |||| | |||
Sbjct 11738 GCATTGCAATTATTGCTTTTAATCTA-TAATTTTTAGTAAGCATAAGTTATCAACTTGCG 11680
Query 305 TTGATTACGTCCCTGCCCTTTGTA 328
|||||| | ||||| | ||||||
Sbjct 11679 TTGATTGTGCCCCTG-CTTTTGTA 11657
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947183338752
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |