Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10]
1,759 sequences; 43,620,960 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq1052 780 0.0
seq800 755 0.0
>seq1052
Length=38482
Score = 780 bits (864), Expect = 0.0
Identities = 496/537 (92%), Gaps = 5/537 (1%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||||| ||||| |||||||||||||||||||||| | ||| ||||||||||||||||
Sbjct 34352 CTTTTATTCTACTGGAGATTTCTGTTCTCCATGAGCTCTTCTTGGGACACCTGCGTTATG 34293
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct 34292 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGGTC 34233
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186
||||||||||||||||||| ||||||| ||| | || |||| ||||||||||||
Sbjct 34232 GGCCCGCGAAGGACCTTAAGACCAGAAATTGGACAT--AAATCCAGCCCCGCTTCATTGA 34175
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
||||||||||||| ||| | ||||||||||||||| |||||||| |||||||| ||
Sbjct 34174 ATAAGTAAAAAAACAATAGGAGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACCTA 34118
Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306
||||||||||| | ||| |||||||| ||| |||||||||||||||||||||||||||
Sbjct 34117 TTCTACACCTCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 34058
Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 34057 TTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 33998
Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 33997 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 33938
Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 33937 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTACT 33878
Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 33877 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 33821
>seq800
Length=2272
Score = 755 bits (836), Expect = 0.0
Identities = 487/529 (92%), Gaps = 7/529 (1%)
Strand=Plus/Minus
Query 15 CTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACA 74
|||| |||||||||||||||||||||| | ||| ||||||||||||||||||||||||
Sbjct 2272 CTACTGGAGATTTCTGTTCTCCATGAGCTCTTCTTGGGACACCTGCGTTATGGTTTAACA 2213
Query 75 GATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCGGCCCGCG 134
||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||
Sbjct 2212 GATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGGTCGGCC-GCG 2154
Query 135 AAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGATTAAGTaa 194
||||||||||| ||||||| ||| | || |||| |||||||||||| |||||||
Sbjct 2153 AAGGACCTTAAGACCAGAAATTGGACAT--AAATCCAGCCCCGCTTCATTGAATAAGTAA 2096
Query 195 aaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTATTCTACAC 254
|||| | ||| | ||||||||||||||| |||||||| |||||||| ||||||||||
Sbjct 2095 AAAA-CAATAGGAGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACCTATTCTACAC 2040
Query 255 CTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCG 314
||| | ||| |||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct 2039 CTCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCG 1980
Query 315 CTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGT 374
||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1979 CTGATTCTGCCANGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGT 1920
Query 375 GGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACC 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1919 GGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACC 1860
Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1859 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTACTTCACTTTG 1800
Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1799 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 1751
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635171236832
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |