Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10]
1,759 sequences; 43,620,960 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq1052 253 3e-65
>seq1052
Length=38482
Score = 253 bits (280), Expect = 3e-65
Identities = 228/279 (82%), Gaps = 7/279 (3%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| || |||||| ||||||||||||||||||||| |||| ||||||
Sbjct 34675 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 34732
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 34733 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 34792
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||| |||||| | |||| ||| | |||| |||||| ||||||||||||||| || |
Sbjct 34793 GAACGCGGTGATAC-CTCCCACACGTTGTAGACGGATATGAATAGGCTTCGGCCTCGCAT 34851
Query 181 CTTAGCAGGCCGGCAACGGGCGTCCCGC-GGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239
|||||| ||| | | || | || | |||| | || | | | | ||| ||||
Sbjct 34852 CTTAGCTGGC--GGATCGTCCATCAGACTTGAAGTGTCTGGTGGT-ATTTCGCGTATTGT 34908
Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||| | || ||| || |||||||||||||||||||
Sbjct 34909 AATTTTAACACGCGTGGGATTAAATCCTTTGCAGACGAC 34947
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819186040576
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |