Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10]
1,759 sequences; 43,620,960 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq1052 747 0.0
seq1217 251 2e-64
seq477 239 1e-60
seq1289 237 5e-60
seq1444 132 1e-28
>seq1052
Length=38482
Score = 747 bits (828), Expect = 0.0
Identities = 469/504 (93%), Gaps = 1/504 (0%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 29774 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 29715
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 29714 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 29655
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||| ||||||| |||| |||||| | |||||||||||||| ||||||| |
Sbjct 29654 TCTCAGGCTCCTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGAAACCATGGCA 29595
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 29594 GGCCAAGACCCTGCCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCG 29535
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
||||||||||||||||| |||||||||| ||||||| | ||||||||||||| ||| |
Sbjct 29534 CAAGGCCATGCGATTCGAGAAGTTATTATAAATCACCCACAAGCCCCGAAGGGCATTGAT 29475
Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360
|||| |||||||||||||| |||||| |||||||| |||||||||||||||||||||||
Sbjct 29474 TTTTAATCTAATAAATACATCCCTTCGTAAGTCGGGATTTTTAGCATGTATTAGCTCTAG 29415
Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420
|||||||||||||||||| ||| ||| |||||||||||||||| ||||||||||||||||
Sbjct 29414 AATTACCACGGTTATCCAAGTAATAAAGTACTATCAAATAAACAATAACTGATTTAATGA 29355
Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480
||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 29354 GCCATTCGCAGTTTCGCCGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 29296
Query 481 AGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||
Sbjct 29295 AGACAAGCATATGACTACTGGCAG 29272
>seq1217
Length=30757
Score = 251 bits (278), Expect = 2e-64
Identities = 147/152 (97%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 499 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 558
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 559 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 618
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAA 152
||||||||||| ||||||| |||| ||||||
Sbjct 619 TCTCAGGCTCCTTCTCCGGGGTCGAGCCCTAA 650
>seq477
Length=59477
Score = 239 bits (264), Expect = 1e-60
Identities = 144/152 (95%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct 159 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTCATTGCCACTACCT 100
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 99 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 40
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAA 152
||||||||||| ||||||| |||| || |||
Sbjct 39 TCTCAGGCTCCTTCTCCGGGGTCGAGCCATAA 8
>seq1289
Length=27655
Score = 237 bits (262), Expect = 5e-60
Identities = 349/493 (71%), Gaps = 1/493 (0%)
Strand=Plus/Plus
Query 12 AATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCGTGTCGG 71
||||| |||||| |||| ||| || ||| | |||||||| | | || || | ||| |
Sbjct 5635 AATTATAAGACCTAAAAAAGCTCTATATTAATATTTATTATTATTATCTTTCTATGTTAG 5694
Query 72 GATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCC 131
|||| |||||| |||||||| ||| || || | |||| |||| | | |||||
Sbjct 5695 GATTAAATAATTTATATGCCTGCTGTTTTCTTTAAATATAATAGCTGTTTTTTAAGCTCC 5754
Query 132 CTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCC 191
||| || | | |||||| | |||| || | || || | |||| | | |
Sbjct 5755 TTCTTTAGAGTTAAGCCCTAACTTTTTATTACTTATTAAAACTATAGCAGGCTAAGACCT 5814
Query 192 TACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGC 251
| | || |||||| ||| |||| |||||| ||| ||| || | || || || ||
Sbjct 5815 TGCTATTAAAAGTTAATAAGGCAAAAATTTAAATAAACTATTACTAGCGTAAAGCTATAT 5874
Query 252 GATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAA 311
||| || ||||||| ||| | | ||||||||| || ||| ||||| ||||||
Sbjct 5875 AATTTAAAAAATTATTATAAATTATTTATAAGCCCCGAAAAGCATTGATTTTTAATCTAA 5934
Query 312 TAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGG 371
|||||| | | ||| || | ||| ||||||| || |||||| ||||||||||| | |
Sbjct 5935 TAAATATATCTCTTTATAAATTGGGATTTTTAGTATATATTAGTTCTAGAATTACTATAG 5994
Query 372 TTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAG 431
|||| | ||| ||| ||| ||| ||||||| |||||| ||||||| ||||||| | ||
Sbjct 5995 TTATTTAAGTAATAAAGTATTATTAAATAAATAATAACTAATTTAATAAGCCATTTGTAG 6054
Query 432 TTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATA 491
||| || |||| |||| ||||| ||||| || || ||||||| ||| | | ||| |||
Sbjct 6055 TTTTGCTATATA-ATTGTTTATATTTAGATATATATAGCTTAATTTTTAAAATAAGTATA 6113
Query 492 TGACTACTGGCAG 504
|||||||||||||
Sbjct 6114 TGACTACTGGCAG 6126
>seq1444
Length=22337
Score = 132 bits (146), Expect = 1e-28
Identities = 330/505 (65%), Gaps = 41/505 (8%)
Strand=Plus/Minus
Query 2 TACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61
|||| ||| ||||| || || |||| ||| | ||| |||||||||| | | || ||
Sbjct 1866 TACTTATTTTAATTATAAAACTTAAAAAAGCTTTATATTAGTATTTATTATTATTATTTC 1807
Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTG--GATGTGGTAGCCGT 119
|| | | ||||| ||||||||| ||||||||||| || || ||| | |||| ||
Sbjct 1806 CCTATATTAGGATTAGGTAATTTGTGCGCCTGCTGCTTTTTTTTTAGATATAATAGCTGT 1747
Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179
|| | | |||| | ||| | | | |||||| | | |||| || | || || |
Sbjct 1746 TTTTTAAGCTCTTTTTCCAGGGTTAAGCCCTAACTTTCTATTACTTATTAAAACTATAGC 1687
Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239
|||| | | | | || |||||| ||| ||||||||||| ||||||| || || ||
Sbjct 1686 AGGCTAAGACCTTGTTATTAAAAGTTAATATGGCAGAAATTTAAATGAACTATTGCTAGC 1627
Query 240 TCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGG 299
|| || || ||| || ||||||| ||| | | ||
Sbjct 1626 ATAAAGCTATATAATTTAAAAAATTATTATAAATTATTTATAAG---------------- 1583
Query 300 TTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTA 359
||| ||| ||||| || | |||||| || |||||||||||
Sbjct 1582 ---TTT---TAAAAAATA------TT----------GATTTTTAATATATATTAGCTCTA 1545
Query 360 GAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATG 419
||||||| | |||||||| || ||| ||||||| ||||||| |||| | |||||||
Sbjct 1544 GAATTACTATAGTTATCCAAATAATAAAGTACTATTAAATAAATAATAATTAATTTAATA 1485
Query 420 AGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTT 479
||| ||| ||||| | |||| |||| ||||| ||||| || || ||||| |||
Sbjct 1484 AGCTATTTATAGTTTTGTTATATA-ATTGTTTATATTTAGATATATATAATTTAATTTTT 1426
Query 480 GAGACAAGCATATGACTACTGGCAG 504
| |||| ||||| | ||| |||||
Sbjct 1425 AAAACAAACATATAATTACGGGCAG 1401
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510373432064
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