Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasiodiplodia_20theobromae_20[genbank_20GCA_5F002111425.1_202017-04- 26] 29 sequences; 43,283,415 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq7 1043 0.0 >seq7 Length=2119142 Score = 1043 bits (1156), Expect = 0.0 Identities = 637/675 (94%), Gaps = 1/675 (0%) Strand=Plus/Plus Query 10 GGTGGCCT-AGCCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTA 68 ||| |||| |||| |||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 5169 GGTTGCCTTAGCCATGTGAATCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTA 5228 Query 69 AATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTA 128 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 5229 AATGGGAGGTAAATTTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTA 5288 Query 129 GAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTG 188 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 5289 GAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGTACGTGAAATTGTTG 5348 Query 189 AAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTG 248 ||||||||||||||||||||||||||| ||||||||||||| |||| | | | |||| | Sbjct 5349 AAAGGGAAGCGCTTGCAACCAGACTTGTCCGCAGTTGCTCAGCCGGTCTCCTGACCGGCG 5408 Query 249 CACTCTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGT 308 |||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||| Sbjct 5409 TACTCTTCTGCGGCCAGGCCAGCATCAGTTCGGGCGGTCGGATAAAGGCCTCGGGAATGT 5468 Query 309 GGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCC 368 ||| || |||||| |||||||||||||||||| ||||||||| ||||||||||||| | Sbjct 5469 GGCTCCTCTCGGGGAGTGTTATAGCCCGGGGTGCAATGCGGCCAGCCTGGACTGAGGAAC 5528 Query 369 GCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCA 428 |||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 5529 TCGCTTCGGCAAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGAAACACGGACCA 5588 Query 429 AGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAA 488 |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| Sbjct 5589 AGGAGTCTAACATCTATGCGAGTGTTCGGGTGTCAAACCCGTACGCGTAATGAAAGTGAA 5648 Query 489 CGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTT 548 |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct 5649 CGGAGGTGGGAACCCGCAAGGGTGCACCATCGGCCGATCCTGATGTCTTCGGATGGATTT 5708 Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5709 GAGCAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 5768 Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 5769 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATT 5828 Query 669 TGGGTATAGGGGCGA 683 ||||||||||||||| Sbjct 5829 TGGGTATAGGGGCGA 5843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999377950