Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasiodiplodia_20theobromae_20[genbank_20GCA_5F002111425.1_202017-04- 26] 29 sequences; 43,283,415 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq19 98.7 1e-18 >seq19 Length=75876 Score = 98.7 bits (108), Expect = 1e-18 Identities = 160/228 (70%), Gaps = 8/228 (4%) Strand=Plus/Minus Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTT-CGCAC 60 ||| || ||||||| ||||||| || || | ||||| |||| || | |||| |||| Sbjct 23038 TTAACCATCCATCATCGGGCAGACGGCACACTTTATACTTCGATTTGTCATCTTACGCAA 22979 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 | ||||||||| | |||||||||| | | ||||| ||| || | | | | Sbjct 22978 AGTGCTGTGTTTTAATTAAACAGTCGTACAACACCATTCTGTGCCTCCTCTTCTA----A 22923 Query 121 ACACGTCGTTCACCAGC---AGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCC 177 || | || | ||| | |||||| |||| ||||| |||||||| | || |||||| Sbjct 22922 ACCTGATATTAATCAGTTAGAATGGCACTCCTTATCCCGCAGTTACGGAGTCAATTTGCC 22863 Query 178 GAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTG 225 || |||||||| | ||| | | |||||||| ||||||||||| || Sbjct 22862 GAGTTCCTTAATGATTGTTAGCTCAAACGCCTTCGTATTCTCTACTTG 22815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694399804917