Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lasiodiplodia_20theobromae_20[genbank_20GCA_5F002111425.1_202017-04-
26] 29 sequences; 43,283,415 total letters
Query= AAMG01000538.1
Length=248
Score E
Sequences producing significant alignments: (Bits) Value
seq19 98.7 1e-18
>seq19
Length=75876
Score = 98.7 bits (108), Expect = 1e-18
Identities = 160/228 (70%), Gaps = 8/228 (4%)
Strand=Plus/Minus
Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTT-CGCAC 60
||| || ||||||| ||||||| || || | ||||| |||| || | |||| ||||
Sbjct 23038 TTAACCATCCATCATCGGGCAGACGGCACACTTTATACTTCGATTTGTCATCTTACGCAA 22979
Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120
| ||||||||| | |||||||||| | | ||||| ||| || | | | |
Sbjct 22978 AGTGCTGTGTTTTAATTAAACAGTCGTACAACACCATTCTGTGCCTCCTCTTCTA----A 22923
Query 121 ACACGTCGTTCACCAGC---AGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCC 177
|| | || | ||| | |||||| |||| ||||| |||||||| | || ||||||
Sbjct 22922 ACCTGATATTAATCAGTTAGAATGGCACTCCTTATCCCGCAGTTACGGAGTCAATTTGCC 22863
Query 178 GAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTG 225
|| |||||||| | ||| | | |||||||| ||||||||||| ||
Sbjct 22862 GAGTTCCTTAATGATTGTTAGCTCAAACGCCTTCGTATTCTCTACTTG 22815
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694399804917
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |