Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasiodiplodia_20theobromae_20[genbank_20GCA_5F002111425.1_202017-04- 26] 29 sequences; 43,283,415 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq19 129 1e-27 >seq19 Length=75876 Score = 129 bits (142), Expect = 1e-27 Identities = 196/276 (71%), Gaps = 10/276 (4%) Strand=Plus/Minus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||| || ||||||||||||||||| | | |||||||| |||||| Sbjct 23228 GCATCTTCACTGCTATTTCAATTTCACTGAGCCAATCATTGAGACAGCTGTTGTATCGTT 23169 Query 73 ACGCCATTCGTGCAG-GTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 131 ||||| |||| | | | | ||| | | ||||| ||| ||||||||||||||| || Sbjct 23168 TTATCATTCATGCAAAGACCGCATTTAACGGCCAAGGTATTCCGCTACCTTAGGACCCTT 23109 Query 132 ATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGC-------TTCGCGTTAGCTA 184 || | || ||||||| || | |||| ||| |||| | | || || ||||| Sbjct 23108 ATAGATAAGGCCGCCATTGAATGGGGGTTCCTTCAAAACCTAGCCTGTTTTAGTCAGCTA 23049 Query 185 ACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT-TCG 243 | ||| |||||| ||| || ||||||| || ||||| ||||| || | || || Sbjct 23048 AATAAATCCGTTAACCATCCATCATCGGGCAGACGGCACACTTTATACTTCGATTTGTCA 22989 Query 244 TGTT-TGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 | || ||| ||||||||||||| | |||||||||| Sbjct 22988 TCTTACGCAAAGTGCTGTGTTTTAATTAAACAGTCG 22953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260799634368