Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasiodiplodia_20theobromae_20[genbank_20GCA_5F002111425.1_202017-04- 26] 29 sequences; 43,283,415 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq19 95.1 3e-17 >seq19 Length=75876 Score = 95.1 bits (104), Expect = 3e-17 Identities = 255/386 (66%), Gaps = 32/386 (8%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | ||| ||||||||| ||| | || ||||||||| |||||| Sbjct 23228 GCATCTTCACTGCTATTTCAATTTCACTGAGCCAATCATTGAGACAGCTGTTGTATCGTT 23169 Query 67 ACGCCTTTCGTGCGG-GTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 125 | ||| ||| | | | | ||| | | ||||| ||| ||||||||||||||| || Sbjct 23168 TTATCATTCATGCAAAGACCGCATTTAACGGCCAAGGTATTCCGCTACCTTAGGACCCTT 23109 Query 126 ATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCA----CT-GC---TTCGATTGCTCT 177 |||| || ||||||| || | ||||| || |||| || || || | | || Sbjct 23108 ATAGATAAGGCCGCCATTGAATGGGGGTT-CCTTCAAAACCTAGCCTGTTTTAGTCAGCT 23050 Query 178 AACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTG-C 236 || | || |||||| |||| || ||||||| || || ||||| ||| ||| | Sbjct 23049 AAATAAATCCGTTAACCATCCATCATCGGGCAGACGGCACACTTTATACTTCGATTTGTC 22990 Query 237 GACTTA-GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCT 295 |||| ||| | ||||||||| |||||||||| | ||||| ||| ||| Sbjct 22989 ATCTTACGCAAAGTGCTGTGTTTTAATTAAACAGTCGTACAACACCATTCTGTGCCTCCT 22930 Query 296 ------------------GTCA--TAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCA 335 ||| |||| ||||| |||| |||| |||||||| |||| Sbjct 22929 CTTCTAAACCTGATATTAATCAGTTAGAATGGCACTCCTTATCCCGCAGTTACGGAGTCA 22870 Query 336 TTTTGCCGAGTTCCTTAACAATAGTT 361 ||||||||||||||||| || ||| Sbjct 22869 ATTTGCCGAGTTCCTTAATGATTGTT 22844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062399691904