Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasiodiplodia_20theobromae_20[genbank_20GCA_5F002111425.1_202017-04- 26] 29 sequences; 43,283,415 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq7 381 1e-103 >seq7 Length=2119142 Score = 381 bits (422), Expect = 1e-103 Identities = 255/279 (91%), Gaps = 4/279 (1%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||||||| |||||| ||||||||||||||||||||| |||| |||||| Sbjct 7926 GTACGAGAGGAACCGCGGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 7983 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct 7984 GCCGCGAAGCTACCATCTGCTGGATTATAGCTGAACGCCTCTAAGTTAGAATCCATGCCA 8043 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTC-GGCCCCGAA 179 ||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||| Sbjct 8044 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCCTCTGGCCCAGAA 8103 Query 180 CCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239 | |||||||||||| ||||| | ||| |||| ||||| | |||||||||||||| Sbjct 8104 TCCTAGCAGGCCGGCGACGGGGGCTCCGTAGAAG-TCGGGGTCCCTAGCTGGCGGATTGC 8162 Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||||||| |||||||||||||||||||||||||||||| Sbjct 8163 AATTTCACAATGCGCAGGGATAAATCCTTTGCAGACGAC 8201 Score = 295 bits (326), Expect = 1e-77 Identities = 197/217 (91%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 63 CGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGA 122 |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct 1 CGCGAAGCTACCATCTGCTGGATTATAGCTGAACGCCTCTAAGTTAGAATCCATGCCAGA 60 Query 123 ACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTC-GGCCCCGAACC 181 ||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||| | Sbjct 61 ACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCCTCTGGCCCAGAATC 120 Query 182 TTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGCAA 241 |||||||||||| ||||| | ||| |||| ||||| | |||||||||||||||| Sbjct 121 CTAGCAGGCCGGCGACGGGGGCTCCGTAGAAG-TCGGGGTCCCTAGCTGGCGGATTGCAA 179 Query 242 TTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||||| |||||||||||||||||||||||||||||| Sbjct 180 TTTCACAATGCGCAGGGATAAATCCTTTGCAGACGAC 216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819199769856