Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lasiodiplodia_20theobromae_20[genbank_20GCA_5F002111425.1_202017-04-
26] 29 sequences; 43,283,415 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq7 381 1e-103
>seq7
Length=2119142
Score = 381 bits (422), Expect = 1e-103
Identities = 255/279 (91%), Gaps = 4/279 (1%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||||||| |||||| ||||||||||||||||||||| |||| ||||||
Sbjct 7926 GTACGAGAGGAACCGCGGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 7983
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct 7984 GCCGCGAAGCTACCATCTGCTGGATTATAGCTGAACGCCTCTAAGTTAGAATCCATGCCA 8043
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTC-GGCCCCGAA 179
||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||
Sbjct 8044 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCCTCTGGCCCAGAA 8103
Query 180 CCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239
| |||||||||||| ||||| | ||| |||| ||||| | ||||||||||||||
Sbjct 8104 TCCTAGCAGGCCGGCGACGGGGGCTCCGTAGAAG-TCGGGGTCCCTAGCTGGCGGATTGC 8162
Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|||||||| ||||||||||||||||||||||||||||||
Sbjct 8163 AATTTCACAATGCGCAGGGATAAATCCTTTGCAGACGAC 8201
Score = 295 bits (326), Expect = 1e-77
Identities = 197/217 (91%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 63 CGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGA 122
|||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct 1 CGCGAAGCTACCATCTGCTGGATTATAGCTGAACGCCTCTAAGTTAGAATCCATGCCAGA 60
Query 123 ACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTC-GGCCCCGAACC 181
||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||| |
Sbjct 61 ACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCCTCTGGCCCAGAATC 120
Query 182 TTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGCAA 241
|||||||||||| ||||| | ||| |||| ||||| | ||||||||||||||||
Sbjct 121 CTAGCAGGCCGGCGACGGGGGCTCCGTAGAAG-TCGGGGTCCCTAGCTGGCGGATTGCAA 179
Query 242 TTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|||||| ||||||||||||||||||||||||||||||
Sbjct 180 TTTCACAATGCGCAGGGATAAATCCTTTGCAGACGAC 216
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819199769856
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |