Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12-
02] 411 sequences; 26,537,341 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq117 693 0.0
>seq117
Length=7839
Score = 693 bits (768), Expect = 0.0
Identities = 562/674 (83%), Gaps = 11/674 (2%)
Strand=Plus/Minus
Query 14 GCCTAGCCGT-GTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATG 72
|||||||| | ||||||||||||||||||||||||| |||||||||||| |||| |||||
Sbjct 3666 GCCTAGCCTTTGTGAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCAAAATG 3607
Query 73 GGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGT 132
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 3606 GGAGGTAAATTTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGT 3547
Query 133 GATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAG 192
|||||||||||||||||||||||| |||||| || ||| || ||||||||||||||||||
Sbjct 3546 GATCGAAAGATGAAAAGCACTTTGAAAAGAGGGTCAAACAGTACGTGAAATTGTTGAAAG 3487
Query 193 GGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGC-CCCTC--GGCCGGTGC 249
|||||||| | ||||||||| | | | | || ||||| ||||| ||||||||
Sbjct 3486 GGAAGCGCCCGTGGCCAGACTTGTGCCCCGCGGACCACCCGGCGCCCTCAGCGCCGGTGC 3427
Query 250 ACTCTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTG 309
|||| | | | |||||||||||| | | | | |||||||||| |||||| |||
Sbjct 3426 ACTCCGCGGGGCGCAGGCCAGCATCGGTTTTCCCAGGGGGATAAAGGCGGCGGGAACGTG 3367
Query 310 GCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCG 369
|| |||| ||| ||||||||||||| | | |||| || | |||| |||| |||
Sbjct 3366 GCTCCCT--CGGGAGTGTTATAGCCCGCCGCGCCATGC-CCCTGGGGGGACCGAGGACCG 3310
Query 370 CGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAA 429
|||| |||| |||||||||||||||||| ||| ||||||||| ||||||||||||
Sbjct 3309 CGCTTCGGCAAGGATGCTGGCGTAATGGCCACCGGCGACCCGTCTTGAAACACGGACCAA 3250
Query 430 GGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAAC 489
|||||| | ||| |||||||| |||||| |||||||| |||| |||||||||||||
Sbjct 3249 GGAGTCAAGCATTGGGGCGAGTGTCTGGGTGCCAAACCCGCACGCGAAATGAAAGTGAAC 3190
Query 490 GGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTG 549
| ||||| || | || ||| ||||||||||||||||||| |||||||||||||
Sbjct 3189 GCAGGTGAGA----GCTTCGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTG 3134
Query 550 AGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGC 609
||||||||| | | | | |||||||||||||||||||||||||||| ||||||||||||
Sbjct 3133 AGTAAGAGCCTTACCGCTTGGACCCGAAAGATGGTGAACTATGCCTGTATAGGGTGAAGC 3074
Query 610 CAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTT 669
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct 3073 CAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATAT 3014
Query 670 GGGTATAGGGGCGA 683
||| || |||||||
Sbjct 3013 GGGCATGGGGGCGA 3000
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079991184050
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |