Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12-
02] 411 sequences; 26,537,341 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq391 116 9e-24
>seq391
Length=101879
Score = 116 bits (128), Expect = 9e-24
Identities = 197/281 (70%), Gaps = 7/281 (2%)
Strand=Plus/Plus
Query 4 GGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCC 63
|| || |||| |||| ||||| ||| ||||||||||||||| | ||||||||
Sbjct 86522 GGGTAAACTGTATCTGCACAGTTATTCCAATTTCACTGAGTCAATCTTAGAGACAGCTGT 86581
Query 64 GCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTA 123
||||||| ||||| |||| | | | | ||| | | ||||| ||||||||||||||
Sbjct 86582 TGTATCGTTATATCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTA 86641
Query 124 GGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGC---TTCGCGTTA 180
||||| | | |||| ||||||| || ||||||| ||| | || | | || | |
Sbjct 86642 GGACCCTCA-CGTTAAGGCCGCCATTGACCGGGGGTTCCTTAAAAACCAAATTTTTATAA 86700
Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240
|| | |||||| |||||| ||||||| | |||||| | |||| | | ||
Sbjct 86701 TTTAGTAGATTTCGTTAACCAGCCGGCATCGGGCAGACATCACACTCAATACTTAGATTT 86760
Query 241 -TCGTGTT--TGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278
|| | || |||| |||||| |||||| | ||||||||||
Sbjct 86761 ATCATCTTTCTGCAAAGTGCTTTGTTTTAATTAAACAGTCG 86801
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260794818112
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |