Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12- 02] 411 sequences; 26,537,341 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq117 257 3e-66 >seq117 Length=7839 Score = 257 bits (284), Expect = 3e-66 Identities = 231/280 (83%), Gaps = 9/280 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| |||||||||||||||| |||| |||| |||||| Sbjct 914 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGTTGTCCGACCGGGCAGT 857 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 856 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 797 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||||| || || | |||| |||| | | || ||||| |||||||| |||||| || | Sbjct 796 GAACGCGGCGACAC-CTCCCGCACGTTGCAGACGGATCAGAATAGGCCTCGGCCTCGTAT 738 Query 181 CTTAGCAGGCCGGCAACGGGCGTCCCGC-GGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239 |||||||||| | | | || | || ||||| || |||| || | ||| ||||| Sbjct 737 CTTAGCAGGC--GGTTCCGCCGCCGGGCTGGAAGTGCCCGGCGGTCTTC-CGCGTATTGC 681 Query 240 AATTTCACCATGCGCAGGGAT-AAATCCTTTGCAGACGAC 278 |||||| || |||| ||||| |||||||||||||||||| Sbjct 680 AATTTCGACACGCGC-GGGATCAAATCCTTTGCAGACGAC 642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819196738304