Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12-
22] 2,687 sequences; 28,556,450 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq2494 383 1e-101
seq2400 136 3e-27
>seq2494
Length=11727
Score = 383 bits (424), Expect = 1e-101
Identities = 1231/1878 (66%), Gaps = 48/1878 (3%)
Strand=Plus/Minus
Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137
||||||||||||||||| | | || || |||| || | || |||||||| || |||
Sbjct 3426 TCGACCGTGAACTGGATGGGCTGGGCGGCTGCCTGCGTGCGCAGGTAGTACATTCCCGTC 3367
Query 65138 TTGAGGCC-AGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCT 65195
|| ||||| ||| ||| | ||| ||||| || | || |||| | | ||||
Sbjct 3366 TTCAGGCCCAGCTT-CCAGCCGGTGAAGTGCATGCTTG-TGATCTTGCCCATGGTGGGCT 3309
Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGA-CCACGATCTGCAGCC 65254
| || || || || | |||||| ||| |||||| |||| ||||| || || |||
Sbjct 3308 CACGCATGTGAATGTTGAGCGACTGCGACTGGTCGATG-AACGCGCCACGGTCGGCCGCC 3250
Query 65255 ATGT---CAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-AC 65310
|| | |||| | || | ||| |||||||| |||||||||||||| | | | |
Sbjct 3249 ATCTGCACAATCGTGCGCTG---CGAGATCTCCCAAACGGTCTTGTACAGA-GCCTTGAT 3194
Query 65311 CTCAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACG 65370
|| || || | |||| ||||| ||||| | ||||| ||||| ||
Sbjct 3193 GTCGGCCGGGATGTTGGGGATGTTCTGGATCGAACCGCCCTCGGCAATGATGCGGTTCTT 3134
Query 65371 CATCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGA-TTGATGA 65429
||| || ||||||| |||| ||| | |||| | | || | ||| |||| |
Sbjct 3133 CATGTTGTCCGACCACAGCCCCATATCAACGAGATCCTTCAGCA-GCCACGGGTTGACAA 3075
Query 65430 CTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGG 65489
| || |||||||| | ||| ||||| || ||||||||||||||| || || |||
Sbjct 3074 CCTGAAACTCGCCCGCCAGCACACGGCGCGAGTAGATGTTGGACGTGTACGGCTCGAAGC 3015
Query 65490 ATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATG 65549
|||| ||||||| || || || | || || || ||||||||||| || |||||||
Sbjct 3014 ATTCGTTGTTGCCCAGGATCTGCGACGTCGACGCTGTTGGCATGGGGGCCACCAACAGAC 2955
Query 65550 AGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTT 65609
||| || | |||| | | || || |||| | |||||||| ||||| | |
Sbjct 2954 TGTTGCGGACGCCGTGCTCCTTGATCTTCAGACGGAGCGAGTCCCAGTCCCACA---GGT 2898
Query 65610 TATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCC--GATACTGGCCGGTGA 65667
| | || | || ||| |||||| || | ||||| |||| || || | || ||
Sbjct 2897 CA--GACGGCTTC-ACGTCCCACATGTCGGGCTGCAGAATTCCCTGAGACA--CAGGAGA 2843
Query 65668 ACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGC 65727
|| | | | || ||||| || ||| || | || | ||| ||
Sbjct 2842 GCCCTCATACGTCGCATAGGTGCCCTCAATCTGGGCCAGGTCGCACGACGCAGTGAGAGC 2783
Query 65728 GGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTA 65787
||| || |||||||| || || | || || || |||||||| ||| |
Sbjct 2782 GGCGTGGTAGATGGTCTCAAAGATTTGCTTGTTGAGCTCCCGTGCCTCGGGCGACTCAAA 2723
Query 65788 CGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACG 65847
||||| | || | | |||| || ||||| || || || || | ||| || |||||
Sbjct 2722 GGGCATGCGCAGCGCCAGGAAAGCATCTGCCAGCCCCTGCACACCCAAACCAATAGGACG 2663
Query 65848 ATGACGCAAATTGGAACGTCTCG-CCTCAGGTACAGGGTAGTAATTGATATCGATAATGC 65906
|| |||| ||| ||||| |||| || || |||||||| |||| ||| || ||||
Sbjct 2662 GTGGCGCATGTTGCTGT-TCTCGGCCTCCGGCACGGGGTAGTAGTTGACATCAATGATGC 2604
Query 65907 GATTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAATCAAAATGT 65965
| |||| ||||| | || || | | ||| | || || ||| ||
Sbjct 2603 GGTTCAGGTTGCGGACAAGCAGCTGTGCAACCTCGTGGAGCTTCTT-GAAGTCG------ 2551
Query 65966 TTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTG 66025
|| | | ||| || | | | ||||| || || || || || || ||||||
Sbjct 2550 -TACGTC--TCGT---TGTTGTAGTCAACAAAAGACGGCAGTGCTAGGGAAGCTAGGTTG 2497
Query 66026 CAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAG 66085
|| ||||| | ||| || || || | ||||| ||||| || ||||||| || || |
Sbjct 2496 CACACAGCAACCTCATCCGGTGCACTGTACTCCACAATCTCCGTGCACAAGTTGGAGCTG 2437
Query 66086 CGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATG 66145
|| |||||||| | |||| || || |||||||| || || |||||||| | ||||
Sbjct 2436 CGGATGGTGCCTAGGTTCTTCTGGTTGCTCTTGCGGTTACAGTGGTCCTTGTAGAGCATG 2377
Query 66146 TACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTC 66205
||||| |||| ||||| || | ||| | | |||| ||| || | |||||
Sbjct 2376 AACGGATTGCCCGTCTCCGTCTGAGCCTCGAGAACTGCGTACCAGAGCTTCTGGGCCTTG 2317
Query 66206 ACCGTACGTACCGCC-CTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTC 66264
||| | | | ||| | ||||| ||| ||||| | || || ||| || || ||
Sbjct 2316 ACCTTTT-TGCGGCCACGACCTTCGCGCTCGTACTTCTCATACAGGGCCTCAAACTCGTC 2258
Query 66265 ACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATC 66324
|| | || || | ||||| ||||||| || || |||||||||| ||| || || |
Sbjct 2257 GCCGTAGACGTCCGCCAGACCGGGACACTCGTTGGGGCACATCAGCGTCCACTCGCCGTT 2198
Query 66325 CTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGC 66384
|| || || || ||| || |||||||| |||||||| || ||| |||||||| ||
Sbjct 2197 CTTCTCAACCCGCTTCATGAACAGATCAGGGATCCAGAGCGCCAGGAACAGATCGCGAGC 2138
Query 66385 TCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATG 66444
|| |||||| |||| || |||||||||| ||| ||||||||||||| || |||||
Sbjct 2137 ACGAATCTCCTCCTTGCCATGGTTTTTGCGCAGGTCAAGGAACTCAAAGACATCAGCATG 2078
Query 66445 CCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTA 66504
||| || || ||||||||| ||| | |||| || ||| || || ||||| || ||
Sbjct 2077 CCAAGGCTCTAGGTAGATGCAGAAAGCGCCCGGGCGCTTGTTTCCGCCCTGGTCCACATA 2018
Query 66505 GCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGT 66564
|||||| |||||| ||||||| | ||| || | || || || || |||| || ||
Sbjct 2017 GCGAGCCGTGTTGTTGTAGACACGGAGCATAGGGATGATGCCATTGGACGTGCCGTTTGT 1958
Query 66565 GCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGC 66624
|||| | ||| ||| || ||||| ||| ||| || || || ||||| ||||| ||
Sbjct 1957 GCCGGCAATGTAGGAGCCGGTAGCCCGGATACGGTGGACGTTGAGGCCAATGCCACCAGC 1898
Query 66625 CGTCTTCGAGATGGCAGCACA-ATC-GGCCACTGTCCGGAATATGCCGTCAATGGAGTCA 66682
|||||| ||||| ||||| || | |||| | || || |||||| ||||
Sbjct 1897 CGTCTTGGAGATCATGGCACAGGTCTTGAGGGTGTC--ATAGATACCCTCAATGCTGTCA 1840
Query 66683 CCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAG 66742
|||| ||| || ||| |||| || | ||||| | |||||| |||| ||||
Sbjct 1839 TCCTTTATGTCCACAAGGAAGCAGGATGACATTTGGGCCTGTGGTGTGCCGGCGTTGAAG 1780
Query 66743 AGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACA 66802
|| || || | || ||||| ||| | | | |||||||| ||||| ||||| | |||
Sbjct 1779 AGTGTCGGCGAGGCATGCGTGAAGAATTTGTTCGACATGTAGTTGTATGTCTCAACCACA 1720
Query 66803 GCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGT 66862
|| | || || || || || | ||| ||||| | | || || |||||
Sbjct 1719 CGCTCCACATTATCACCCCAGATGCCAACTGCCACGCGCATAATCATGTGCTGCGGCCGC 1660
Query 66863 TCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAG 66922
||||| | | | | || | | || ||| || || ||||| ||||||| ||||||
Sbjct 1659 TCGACAATCTTGCCATCGAGCTTGAGTAGGTAAGACCGCTCCAGTGTCTTGAAACCAAAA 1600
Query 66923 TACGAGTAATTGAAATCG 66940
|| ||| ||||| |||
Sbjct 1599 TATTGGTAGTTGAAGTCG 1582
>seq2400
Length=47555
Score = 136 bits (150), Expect = 3e-27
Identities = 337/502 (67%), Gaps = 11/502 (2%)
Strand=Plus/Plus
Query 61434 GAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACA--TTTGGTGAACGA 61491
||| || |||||||| |||| |||||| | || || || | || |||| | | ||
Sbjct 7443 GAAGGCCGATTGGGCTCTCAAGTGGATCTC-AG-ACCGCGAGTCCACCTTTGCTCAGCGC 7500
Query 61492 TTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTT 61551
|| | || ||||| | || ||||| | || ||||| || | || | | |||||
Sbjct 7501 CTGGTCGCTTTTGCCGCTGTGGAGGGCATCTTCTTCAGCGGTGCCTTCTCTTCCATCTTC 7560
Query 61552 TGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGC 61611
||| ||||||| || || || ||||| || ||||||||| ||| ||| | || || ||
Sbjct 7561 TGGCTGAAGAAGCGCGGCCTGATGCCTGGCCTGACCTTCTCCAACGAGCTTATTTCTCGT 7620
Query 61612 GACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGT 61671
||||||||| |||| || || ||| |||| ||| | ||||| ||| ||
Sbjct 7621 GACGAGGGCCTGCACACCGACTTCGCTTGCCTGCTGTTCTCTC---ATCTGAAGAACCGC 7677
Query 61672 CCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGT-GAGGCGGTAACTATCGAACAGGAATT 61730
|| ||||| | ||||| | ||| || || || | || || ||||| ||
Sbjct 7678 CCCAGCAAGGAGATGATCCAGGAGATAAT-CGTCGATGCTGTCAAGATTGAGCAGGAGTT 7736
Query 61731 TCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTA 61790
|| || || || | ||| | | || |||||||||| | ||| ||| ||||||
Sbjct 7737 CCTCACCGAGGCCCTTCCCTGCGCTCTGCTCGGCATGAACTCCACACTCATGAAGCAGTA 7796
Query 61791 TATTGAATTTGTTGCCGACCGTCTGTTGGTCG-ATTTGGGTATGAAGCGGATCTATAATA 61849
||||| || ||||||||||| || |||| | | || |||| || | || |
Sbjct 7797 CATTGAGTTCGTTGCCGACCGCCTTCTGGTTGCCCTCGGCAATGATAAGG-TGTACCGTT 7855
Query 61850 CGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCG 61909
| | ||||| || || |||||||| | || || |||| ||||||||| || || ||||
Sbjct 7856 CCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTGGGTGGCAAGACCAACTTCTTCG 7915
Query 61910 AGAAACGTGTAGGCGACTATCA 61931
|||| ||||| || ||||| ||
Sbjct 7916 AGAAGCGTGTCGGTGACTACCA 7937
Score = 132 bits (146), Expect = 4e-26
Identities = 210/295 (71%), Gaps = 7/295 (2%)
Strand=Plus/Plus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||| ||| || ||||| |||||||| | |||||| |||| |
Sbjct 7034 ATCTGGCAAATGTACAAGAAGCACGAGGCTTCGTTCTGGACTGCTGAGGAGATCGACCTC 7093
Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202
||||| || || | |||||| | || | | ||| | ||| | ||| |
Sbjct 7094 TCCAAGGATCTGCACGACTGGAACAACCGCCTGAACGAT-GATGAGCGCTTCTTCGTCTC 7152
Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262
|| | |||||||||||||||| || ||||| |||||||| ||||| || | || ||
Sbjct 7153 GCACATCCTGGCGTTCTTTGCCGCCTCCGACGGCATCGTCAACGAGAACCTAGTTGAGCG 7212
Query 61263 TTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321
||| | || ||||| || ||| ||||||| || || || |||||||||||||| |
Sbjct 7213 CTTCAGTGC-TGAGGTCCAGGTGCCGGAGGCTCGCTGCTTTTACGGCTTCCAGATCATGA 7271
Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376
||||||| |||||||| |||| ||| | |||||||| || ||||||| |||
Sbjct 7272 TGGAGAACGTCCACTCCGAGACATACTCCCTGCTCATCGACACCTACATCAAGGA 7326
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397554980517680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |