Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12-
22] 2,687 sequences; 28,556,450 total letters
Query= NC_027867.1
Length=651523
Score E
Sequences producing significant alignments: (Bits) Value
seq388 118 4e-21
seq2129 86.0 3e-11
>seq388
Length=5549
Score = 118 bits (130), Expect = 4e-21
Identities = 149/202 (74%), Gaps = 2/202 (1%)
Strand=Plus/Plus
Query 448640 GCGCCGTAGGACTTGAAGGAGACGCGCTCCATGTCGCCCAATCGGAGCCCGCCGTGTCGC 448699
|||||||||| ||| | || |||||||||| ||||||| || || ||||||| |||
Sbjct 2067 GCGCCGTAGGCGATGAGGCAGTCGCGCTCCATCTCGCCCAGCCGCAGGCCGCCGTCGCGC 2126
Query 448700 AACTTGCCCTCGGTGGGCTGCCGCGTGAGGAGCGAGTACGGTCCCCTCTGC-CGCGTGTG 448758
| ||||||||| ||||||||||| | || | | ||| |||| ||| |||| |||
Sbjct 2127 GAGCGGCCCTCGGTCGGCTGCCGCGTCAAGATGGCGCGCGG-GCCCTTTGCGCGCGAGTG 2185
Query 448759 CATCTTCTCCGAGGCCAGTTGCTTGAGGCTCTGGAAGAAGAAGGGCGCGTAGAACATGCG 448818
|||||| ||| ||| |||||||||| |||| || ||| ||| ||| ||| ||| |
Sbjct 2186 CATCTTGTCCTGCACCATGTGCTTGAGGCGCTGGTAGTAGATGGGACCGTTGAAGATGTG 2245
Query 448819 GCACGGCATCATCTCGCCCGTC 448840
| |||| ||||||||||
Sbjct 2246 CGCCTCCATCGGCTCGCCCGTC 2267
>seq2129
Length=18377
Score = 86.0 bits (94), Expect = 3e-11
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 349079 AGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAG 349138
|| ||||||||||||| |||| ||||| ||||||||||| | | || ||||| ||
Sbjct 2511 AGGATCTCCTTGAGTCGCGGCACACCCAGTGTCACGTTCTTCGATGACACACCGGCGAAA 2570
Query 349139 TGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATG 349198
||||| || | || |||| ||||||| ||||| || || |||| |||| | |
Sbjct 2571 TGGAATGTGTTCAGAGTCATCTGCGTGGCCGGCTCACCAATCGACTGTGCCGCCAACACA 2630
Query 349199 CCTACCATCTCGCCGGG 349215
|| ||||||||||| ||
Sbjct 2631 CCCACCATCTCGCCCGG 2647
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2084665677763226
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |