Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq122 277 3e-72 seq307 154 2e-35 >seq122 Length=8359 Score = 277 bits (306), Expect = 3e-72 Identities = 201/229 (88%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| ||| |||||| |||||||||||| ||| | Sbjct 6201 GTACAAAGGGCAGGGACGTAATCAACGCATGCT-GATGACATGCGCTTACTAGGCATT-C 6258 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| ||| | |||||| Sbjct 6259 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGGGTTTAACAAGATT 6318 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| |||||||||||||| ||||||||| ||||||||||||||||||| Sbjct 6319 ACCCAGACCTTTCGGCCAAGGTGATTGACTCGTTGGCCCTGTCAGTGTAGCGCGCGTGCG 6378 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6379 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 6427 >seq307 Length=737 Score = 154 bits (170), Expect = 2e-35 Identities = 123/144 (85%), Gaps = 3/144 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| ||| |||||| |||||||||||| ||| | Sbjct 425 GTACAAAGGGCAGGGACGTAATCAACGCATGCT-GATGACATGCGCTTACTAGGCATT-C 368 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| ||| | |||||| Sbjct 367 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGGGTTTAACAAGATT 308 Query 120 ACCCGGACCTGTCGGCCAAGGTGA 143 |||| ||||| ||||||||||||| Sbjct 307 ACCCAGACCTTTCGGCCAAGGTGA 284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751996277365