Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09]
511 sequences; 25,022,896 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq122 277 3e-72
seq307 154 2e-35
>seq122
Length=8359
Score = 277 bits (306), Expect = 3e-72
Identities = 201/229 (88%), Gaps = 3/229 (1%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| ||| |||||| |||||||||||| ||| |
Sbjct 6201 GTACAAAGGGCAGGGACGTAATCAACGCATGCT-GATGACATGCGCTTACTAGGCATT-C 6258
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| ||| | ||||||
Sbjct 6259 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGGGTTTAACAAGATT 6318
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||| ||||| |||||||||||||| ||||||||| |||||||||||||||||||
Sbjct 6319 ACCCAGACCTTTCGGCCAAGGTGATTGACTCGTTGGCCCTGTCAGTGTAGCGCGCGTGCG 6378
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6379 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 6427
>seq307
Length=737
Score = 154 bits (170), Expect = 2e-35
Identities = 123/144 (85%), Gaps = 3/144 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| ||| |||||| |||||||||||| ||| |
Sbjct 425 GTACAAAGGGCAGGGACGTAATCAACGCATGCT-GATGACATGCGCTTACTAGGCATT-C 368
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| ||| | ||||||
Sbjct 367 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGGGTTTAACAAGATT 308
Query 120 ACCCGGACCTGTCGGCCAAGGTGA 143
|||| ||||| |||||||||||||
Sbjct 307 ACCCAGACCTTTCGGCCAAGGTGA 284
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751996277365
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |