Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09]
511 sequences; 25,022,896 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq122 185 5e-45
seq288 178 7e-43
>seq122
Length=8359
Score = 185 bits (204), Expect = 5e-45
Identities = 111/117 (95%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||
Sbjct 6729 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGGAGGTCAAAATGATAACACCCCCC 6788
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 6789 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 6845
>seq288
Length=815
Score = 178 bits (196), Expect = 7e-43
Identities = 109/117 (93%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|||||||||||||| ||||||||||||||||||||| ||||||||||||||| | ||
Sbjct 264 GAACCCAAAGACTTKGATTTCTCGTAAGGTGCCGAGGAGGTCAAAATGATAACACCCCCN 205
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 204 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 148
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278398666290
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |