Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09]
511 sequences; 25,022,896 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq122 504 1e-140
seq288 232 1e-58
>seq122
Length=8359
Score = 504 bits (558), Expect = 1e-140
Identities = 300/314 (96%), Gaps = 0/314 (0%)
Strand=Plus/Minus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||
Sbjct 7160 TGGTCCGGCCGGGCCTTTCCTTCTGGGGAACCGCATGCCCTTCACTGGGCGTGTGTGGGA 7101
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7100 ACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 7041
Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 7040 TAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 6981
Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244
||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct 6980 AATGATTAATAGGGATAGTCGGGGGCATCTGTATTCAATTGTCAGAGGTGAAATTCTTGG 6921
Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304
||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 6920 ATTTATTGAAGACAAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAGTGA 6861
Query 305 ACGAAAGTTAGGGG 318
||||||||||||||
Sbjct 6860 ACGAAAGTTAGGGG 6847
>seq288
Length=815
Score = 232 bits (256), Expect = 1e-58
Identities = 139/146 (95%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 173 TAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGG 232
||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 1 TAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGCATCTGTATTCAATTGTCAGAGG 60
Query 233 TGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTC 292
||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||
Sbjct 61 TGAAATTCTTGGATTTATTGAAGACAAACTACTGCGAAAGCATTTGCCAAGGATGTTTTC 120
Query 293 ATTAATCAGTGAACGAAAGTTAGGGG 318
||||||||||||||||||||||||||
Sbjct 121 ATTAATCAGTGAACGAAAGTTAGGGG 146
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915195323328
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |