Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09]
511 sequences; 25,022,896 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq122 875 0.0
>seq122
Length=8359
Score = 875 bits (970), Expect = 0.0
Identities = 590/655 (90%), Gaps = 5/655 (1%)
Strand=Plus/Minus
Query 29 GCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTC 88
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 5324 GCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTCCTTC 5265
Query 89 TAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAA 148
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5264 TAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAA 5205
Query 149 GCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACC 208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5204 GCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACC 5145
Query 209 AGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCAGGCC 268
||||||| || | || || |||| | | ||||| |||| | | | ||||||
Sbjct 5144 AGACTTGTTGGC-GGTGTTCCGCCGGTCTTCTGACCGGTCTACTCACCGTCTG-CAGGCC 5087
Query 269 AGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTT 328
||||||| || || | | ||||||| || ||||||||||| || || ||| |||||
Sbjct 5086 AGCATCATCTGGGACCGCTGGATAAAAGCGGAGGGAATGTGGCTCC--TCCGGGAGTGTT 5029
Query 329 ATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATGCTG 388
||||||| ||| ||| | || | | | ||||||||||||| ||||||||||||||
Sbjct 5028 ATAGCCCTCTGTGTAATACAGCGAGTCCCGGGTGAGGTCCGCGCTTCGGCTAGGATGCTG 4969
Query 389 GCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCG 448
|||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 4968 GCGTAATGGTCGTAAGCGGCCCGTCTTGAAACACGGACCAAGGAGTCTAACATCTATGCG 4909
Query 449 AGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAG 508
|||||| ||||||||||||| | ||||||||||||||||||||||||||||||| | |
Sbjct 4908 AGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGGAGGTGGGAACCTTTTA- 4850
Query 509 GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTG 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4849 GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTG 4790
Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 4789 GGACCCGAAAGATGGTGAACTATGCCTGGATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 4730
Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 4729 GGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 4675
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079989039050
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |