Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq122 875 0.0 >seq122 Length=8359 Score = 875 bits (970), Expect = 0.0 Identities = 590/655 (90%), Gaps = 5/655 (1%) Strand=Plus/Minus Query 29 GCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTC 88 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 5324 GCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTCCTTC 5265 Query 89 TAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAA 148 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5264 TAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAA 5205 Query 149 GCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACC 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5204 GCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACC 5145 Query 209 AGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCAGGCC 268 ||||||| || | || || |||| | | ||||| |||| | | | |||||| Sbjct 5144 AGACTTGTTGGC-GGTGTTCCGCCGGTCTTCTGACCGGTCTACTCACCGTCTG-CAGGCC 5087 Query 269 AGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTT 328 ||||||| || || | | ||||||| || ||||||||||| || || ||| ||||| Sbjct 5086 AGCATCATCTGGGACCGCTGGATAAAAGCGGAGGGAATGTGGCTCC--TCCGGGAGTGTT 5029 Query 329 ATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATGCTG 388 ||||||| ||| ||| | || | | | ||||||||||||| |||||||||||||| Sbjct 5028 ATAGCCCTCTGTGTAATACAGCGAGTCCCGGGTGAGGTCCGCGCTTCGGCTAGGATGCTG 4969 Query 389 GCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCG 448 |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 4968 GCGTAATGGTCGTAAGCGGCCCGTCTTGAAACACGGACCAAGGAGTCTAACATCTATGCG 4909 Query 449 AGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAG 508 |||||| ||||||||||||| | ||||||||||||||||||||||||||||||| | | Sbjct 4908 AGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGGAGGTGGGAACCTTTTA- 4850 Query 509 GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTG 568 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4849 GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTG 4790 Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 4789 GGACCCGAAAGATGGTGAACTATGCCTGGATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 4730 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 4729 GGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 4675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079989039050